Conserved Protein Domain Family
C1_aPKC_zeta

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cd21095: C1_aPKC_zeta 
protein kinase C conserved region 1 (C1 domain) found in the atypical protein kinase C (aPKC) zeta type
PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Members of this family contain C1 domain found in aPKC isoform zeta. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410448
Aligned: 6 rows
Threshold Bit Score: 127.024
Created: 13-Jan-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on structure evidence that Homo sapiens PKC-gamma binds two Zn2+ ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #            #  #             #  #    #  #       #   
Q05513       129 NGHLFQAKRFnrrAYCGQCSERIWGLARQGYRCINCKLLVHKRCHGLVPltCRKH 183 human
NP_001093735 128 NGHLFQAKRFnrkAYCGQCSERIWGLGRQGYKCINCKLLVHKRCHILVPltCKKH 182 tropical clawed frog
XP_014344177 129 NGHLFQAKRFnrrAYCGHCSERIWGLGRQGYKCINCKLLVHKRCHKLVPltCLRH 183 coelacanth
NP_001025262 129 NGHLFQAKRFnrkAYCGHCSERIWGLGRQGYKCINCKLLVHKRCHKLVPltCQRH 183 zebrafish
OXB54888      30 NGHLFQAKRFnrrAYCGQCSERIWGLSKQGYKCINCKLLVHKRCHILVPltCKRH 84  scaled quail
XP_007900297  27 NGHLFQAKRFnrrAYCGHCSERIWGLGRQGYKCINCKLLVHKRCHKLVPlsCQRH 81  elephant shark

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