Conserved Protein Domain Family
C1_aPKC_iota

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cd21094: C1_aPKC_iota 
protein kinase C conserved region 1 (C1 domain) found in the atypical protein kinase C (aPKC) iota type
PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Members of this family contain C1 domain found in aPKC isoform iota. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410447
Aligned: 6 rows
Threshold Bit Score: 123.574
Created: 13-Jan-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on structure evidence that Homo sapiens PKC-gamma binds two Zn2+ ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #            #  #             #  #    #  #       #   
NP_001084068 132 NGHTFQAKRFnrrAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTieCGRH 186 African clawed frog
XP_007901955 132 NGHTFQAKRFnrrAHCAFCTDRIWGLGRQGYKCTNCKLLVHKKCHKLVTieCGRH 186 elephant shark
Q90XF2       132 TGHAFQAKRFnrrAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTveCGRQ 186 zebrafish
XP_014342007 167 NGHTFQAKRFnrrAYCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTieCGRP 221 coelacanth
P41743       139 NGHTFQAKRFnrrAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVTieCGRH 193 human
KFV80665     105 NGHTFQAKRFnrrAHCAICTDRIWGLGRQGYKCINCKLLVHKKCHKLVSieCGRH 159 Struthio camelus australis

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