Conserved Protein Domain Family
WH_NTD_PHF10

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cd21085: WH_NTD_PHF10 
N-terminal winged helix DNA-binding domain found in PHD finger protein 10 (PHF10) and similar proteins
PHF10, also termed BRG1-associated factor 45a (BAF45a), or XAP135, is involved in transcription activity regulation by chromatin remodeling. It is a component of the neural progenitors-specific chromatin remodeling complex (npBAF complex) and plays a role in the proliferation of neural progenitors. The model corresponds to the N-terminal winged helix DNA-binding domain of PHF10, which is structurally related to the SKI/SNO/DAC domain that is found in a number of metazoan chromatin-associated proteins.
Statistics
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PSSM-Id: 411035
Aligned: 39 rows
Threshold Bit Score: 111.506
Created: 14-Nov-2018
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8WUB8        73 NLIEYKWPPde---tGEYYMLQEQVSEYLGV-TSFKRKYPDLERRDLSHKEKLYLRELnvit---etqCTLGLTALRSd- 144 human
XP_011403732  71 KLLEYQWPPgggnvaSKWYMLQEQVGEFLDV-RSMMRRYPDLERRSLDIEEKKYLLDIeavn---etqCNMGLVAMESd- 145 Amphimedon quee...
XP_023211120 127 DLFEYQWPVg----kGDYYILQEQISDFLCI-KSFRRRYPDLTRRVVEPEERRYLKEKgvvs---emqCELGLTAIKAd- 197 bark scorpion
RMX46440      65 RLFEYQWPPdr---sGEYYLLRHQVCQFLET-EDLEERNPDLERHVVVDDEKLYLKEQgvi-----tdETQELTAYKTe- 134 Pocillopora dam...
OQR66358     121 TLLEHDWPLl----sGQTWVLQDNLAEFVGI-KNIKRRYPELTRRNIESDEREFLRAKgyvt---dmqCDLGLVALRWd- 191 Tropilaelaps me...
EYC43458      84 DLIEYEWPLk----sGDKYFLQEQVGDLLDI-KSFSRKFPDMSRRKVEKVERDWLCATynihqimnetQLRDLCAMRSv- 157 Ancylostoma cey...
NP_001041113  61 DIIEYEWPVk----sGDRWFLQEQIGELLDI-KSFSRKYPDFTRRKVNHEEREFLEWNfnvhkllnetLLRDMNAMRAs- 134 Caenorhabditis ...
RDD44085      66 PFFEYQWPPs----sGNYYALQSLLSRFLDE-PTFHQRYLSLNRRRIGLKERQHLREIgll----dnkPLAKIVAIQCnf 136 Trichoplax sp. H2
KRY56896      41 YPVEYAWPVg----sQNTYMVEKEVIQFLGV-TNFKERYPNLHRHNIVAEEYEYLLSNlrcg---tktIDEELIALKTv- 111 Trichinella bri...
CBY10573      24 KINEYEWPPd----sGNKYVLTEQLIAFLDFsGNFKRKFPTVPTRKLEQAEIKHLFALeyln---esqYSIGVSVMSLv- 95  Oikopleura dioica
Q8WUB8       145 EVIDLMIKEYPAKHAEY 161 human
XP_011403732 146 GVLELMADEFPDKYKEY 162 Amphimedon queenslandica
XP_023211120 198 DILELISKDFPDKFHEY 214 bark scorpion
RMX46440     135 DVCQIMIDSFPKKYKEY 151 Pocillopora damicornis
OQR66358     192 EVGEVIAREFPEKFSEW 208 Tropilaelaps mercedesae
EYC43458     158 EIHDLMASEYPAIYQEF 174 Ancylostoma ceylanicum
NP_001041113 135 EIHDMMQSDFGDIYMEY 151 Caenorhabditis elegans
RDD44085     137 KLIEVMQNEYPDRYREY 153 Trichoplax sp. H2
KRY56896     112 EVLKLMSGDFPGKFTEY 128 Trichinella britovi
CBY10573      96 DALDLMKNEFTAKYEDY 112 Oikopleura dioica
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