Conserved Protein Domain Family
DHD_SKIDA1

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cd21082: DHD_SKIDA1 
Dachshund-homology domain found in SKI/DACH domain-containing protein 1 (SKIDA1) and similar proteins
SKIDA1 is also known as protein DLN-1. Its biological function remains unclear. The Dachshund-homology domain (DHD), also known as the N-terminal Ski/Sno/Dac domain, adopts a mixed alpha/beta structure containing a helix-turn-helix motif, similar to features found in the forkhead/winged-helix family of DNA binding proteins. It contains a conserved CLPQ motif and can bind co-factors. Its structure suggests that it may also bind DNA.
Statistics
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PSSM-Id: 410785
Aligned: 12 rows
Threshold Bit Score: 144.408
Created: 12-Feb-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q1XH10         6 SGFEEVDGVRLGYLIIKGKQMFALSQVFTDLLKNIpRTTVHKRMDHLKVKKHHCDLEELRKLKAINSIafhaAKCTLISR 85   human
XP_005997143   6 SGYEEVDGVKLGYLIIKGKQMFALSQVFTDLLKNIpRTTVHKRMDHLKVKKHHCDLEELRKLKAINSIafhaAKCTLISK 85   coelacanth
RXN00740       6 SGYEEVDGVKLGYLIIKGKQMFALSQVFTDLLKNIpRTTVHKRMDHLKIKKHHCDLEELRKLKAIHSIafhaAKCTLISR 85   sterlet
XP_007887928  29 SGYEEVDGVRLGYLIIKGKQMFALSQVFTNLLKNIpRTTVHKRMDHLNVKKHHCDLEELRKLKAIHSIafhaAKCTLISR 108  elephant shark
XP_019630425  14 GGHALVNGARLGYLYVGGKQMFALSEVFTTLLGNIpRTTVHKRMDYLSVDKHPCTLDELRKLKSLNAIafhsAKCTLISR 93   Belcher's lanc...
OCT59945       6 AGYEEVAGTKLGYLRVGGRQLFALAQVLSGPLRGVpRGRVCRRMERLRIQIRRCDLRELRALKALRSVpsraVQCCLISL 85   African clawed...
XP_020629780  20 CGRLVFRGVELAYLNIDGEYMLPLAELLALVLPTTpRTTLFTRMEKMKVRRHFCEPEEIKLLKTVNGIhgssANCTLLSK 99   Orbicella fave...
XP_002110717  11 CRIRIFHNVELGVILRNGKEYFCLTQLYDRLWPNTsRMTTFNRIDRLKCKKLSCTLDELNMLKGIKALgstaTRTTLLPT 90   Trichoplax adh...
XP_028392201  32 CGRTEYHGIGMAYIYIRGKLMFTMSEVARNLYPKWpRTTLNDRVRQMKIKWYTCTTNEIEKVLSVRGIvkfgVHCTLISK 111  Dendronephthya...
XP_028398704  43 SGRIKFKGEDMLFLTVNGIQMFTFYEIMLKLCQGTkRGTVGNRFTRLKATKHACNRAEVDLVKELGGTkqafSNCTLVSR 122  Dendronephthya...
NP_001120121   6 SGYEVVDGVKLGYLVIKGKQMFALSQVFTDLLKNIpRTTVHKRMDHLRVKKHQCDVEELRKLKAINSIafhaAKCTLISR 85   tropical clawe...
GCF52174       6 WGFEEVDGVRLGYLVIQGKQMFALSQVFTDLLKNIpRTTVHKRMDHLKVKKHHCDLEELRKLKALNSIafhaAKCTLISR 85   Paroedura picta
Q1XH10        86 EDVEALYTSCK 96   human
XP_005997143  86 EDVEALYTSCK 96   coelacanth
RXN00740      86 EDVETLYTSCK 96   sterlet
XP_007887928 109 EDVEALYTSCK 119  elephant shark
XP_019630425  94 QDVEALCNSCE 104  Belcher's lancelet
OCT59945      86 EDLHVLCASSW 96   African clawed frog
XP_020629780 100 TEVEKYCSMYI 110  Orbicella faveolata
XP_002110717  91 DEVERLYNYTQ 101  Trichoplax adhaerens
XP_028392201 112 EDLDMFSSVYE 122  Dendronephthya gigantea
XP_028398704 123 EDVERYWEKYS 133  Dendronephthya gigantea
NP_001120121  86 EDVEALYTSCK 96   tropical clawed frog
GCF52174      86 EDVEALYTSCK 96   Paroedura picta
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