3EQ5,1SBX


Conserved Protein Domain Family
DHD_Ski_Sno

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cd21079: DHD_Ski_Sno 
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Dachshund-homology domain found in Ski, Ski-like protein (Sno), and similar proteins
Ski may play a role in terminal differentiation of skeletal muscle cells but not in the determination of cells to the myogenic lineage. It functions as a repressor of transforming growth factor-beta (TGF-beta) signaling. Ski-like protein, also known as SKIL or Sno, is the ski proto-oncogene homolog. It may have regulatory roles in cell division or differentiation in response to extracellular signals. The Dachshund-homology domain (DHD), also known as the N-terminal Ski/Sno/Dac domain, adopts a mixed alpha/beta structure containing a helix-turn-helix motif, similar to features found in the forkhead/winged-helix family of DNA binding proteins. It contains a conserved CLPQ motif and can bind co-factors. Its structure suggests that it may also bind DNA.
Statistics
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PSSM-Id: 410782
Aligned: 29 rows
Threshold Bit Score: 131.148
Created: 12-Feb-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EQ5_A        31 LTQTVLEGESISCFQVGGEKRLCLPQVLNSVLREFt-LQQINTVCDELyIYCSRCTSDQLHILKVLGILPfnapSCGLIT 109  human
XP_009026539   4 LSETQLEDQVIACFDIGGEKRLCLAQIIRNILPNFf-LNEITAVFTKFyIPSAVCSNAQLNMLKEKDIIPanvlHCGLVT 82   Helobdella rob...
KRZ14451     417 CQQTLFEGESVACFVVGGERRLCFTQLLHSASFRQfsFADISRACAFLhIQCPPTSREQLDTLKLLGILPvsstSCGLVT 496  Trichinella zi...
XP_020900464  91 FKETLVDQIPLACFSYGGEKRLCFKDLVEKVLKGFt-THAINSARDRLqIFCPRCTPQQLEILKLAGVLPwsctSAGLIT 169  Exaiptasia pal...
KFD58276     106 CEQTLFEGEWITCFVIGGEKRLCLTQFMHSRSLRRftFSDINKTCAYLnIHCPPCSREQMEALKLLNVLPvtftNSALIT 185  pig whipworm
XP_002159999  63 YRTTYLEGYTVACFLVGGEKRLCFSELVHTVLKDIn-VQEIFEKRDKLlIFTSKCSMKQLDELKYNGVLPwtssSSNLIT 141  Hydra vulgaris
XP_028394208  94 VKRTLLDGIPIACFNIGGEKRLCFEQLIAEVLKEFs-LSEVNNSRDHLkIYCPKCDEDQLESLKLSKAIPwsdsSSLLIT 172  Dendronephthya...
TRY80055     398 LEEAILNGESIPAFNVGGELRMCLPQIIRQTLSHFh-VQQICKACEELqVHCADCTNSQLASLKAGGYLAmsasRCGLIT 476  Tigriopus cali...
KHN86433      51 LKSTMLGGHLISCFVIGGECRLCFPQIISVVLQGVk-VDDVNDLFVDLnIHISVASQQQLDTLKLAGVMPmtadSCGLVT 129  dog roundworm
VDD88239      49 LKSTRLAGQLISCFVVGGECRLCLPQFLAMVLPNVn-DAIIQKVNSDLqIHTAIATPTQMKSLKISGILPpgasTCSLIR 127  human pinworm
3EQ5_A       110 LTDAQRLCNALL 121  human
XP_009026539  83 KSDAQRFCSVLL 94   Helobdella robusta
KRZ14451     497 KSDATRLHSFLR 508  Trichinella zimbabwensis
XP_020900464 170 KTDAFRLIGVLK 181  Exaiptasia pallida
KFD58276     186 KTDAVRLYGFLC 197  pig whipworm
XP_002159999 142 KSDSYRLIGALQ 153  Hydra vulgaris
XP_028394208 173 KSDAYRLCSALL 184  Dendronephthya gigantea
TRY80055     477 KSDAERLTSYLH 488  Tigriopus californicus
KHN86433     130 KSDAERLVAKLL 141  dog roundworm
VDD88239     128 KSDAERLVSRLL 139  human pinworm
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