3EQ5,1L8R


Conserved Protein Domain Family
DHD_Ski_Sno_Dac

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cd21074: DHD_Ski_Sno_Dac 
Dachshund-homology domain found in the Ski/Sno/Dac family of transcriptional regulators
The Dachshund-homology domain (DHD), also known as the N-terminal Ski/Sno/Dac domain, adopts a mixed alpha/beta structure containing a helix-turn-helix motif, similar to features found in the forkhead/winged-helix family of DNA binding proteins. It contains a conserved CLPQ motif and can bind co-factors. Its structure suggests that it may also bind DNA. Members of this family include the Ski protein, Ski-like protein (Sno), and Dachshund proteins. Ski may play a role in terminal differentiation of skeletal muscle cells but not in the determination of cells to the myogenic lineage. It functions as a repressor of transforming growth factor-beta (TGF-beta) signaling. Ski-like protein, also known as SKIL or Sno, is the ski proto-oncogene homolog. It may have regulatory roles in cell division or differentiation in response to extracellular signals. Dachshund proteins are essential components of a regulatory network controlling cell fate determination. They have been implicated in eye, limb, brain, and muscle development.
Statistics
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PSSM-Id: 410781
Aligned: 13 rows
Threshold Bit Score: 75.4079
Created: 20-Mar-2017
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EQ5_A         31 LTQTVLEG-ESISCFQVGGEKRLCLPQVLNSVLREFt----LQQINTVCDelyiyCSRCTs---DQLHILKVLGIlpf-- 100  human
1L8R_A          7 CKXVDLRG-AKVASFTVEGCELICLPQAFDLFLKHLvg--gLHTVYTKLKrleitPVVCNv---EQVRILRGLGAiqp-- 78   human
CCD77600      198 LVPSLIDG-EVIMGFNVWGEKRLCLPHLFRFVLHDVdl-qiIDKACTKLQi---aCTTCTp---AQLSLLHSRQIlpr-- 267  Schistosoma m...
CDS31401      148 LVYSIVEG-EKVMGFNVWGEVRLCLPHLLRFVLYDVdi-deIGQALSKLRi---aCTKCSq---RQLTMLHGCNAlpa-- 217  Hymenolepis m...
Q2VWA4         41 VGQVILYG-IPIVSLVIDGQERLCLAQISNTLLKNFsy-neIHNRRVALGi---tCVQCTp---VQLEILRRAGAmpi-- 110  human
AQT19787      113 FTYTLLNK-TYIASFNNDGEKLLCLPQILNLLKNID-----ISDINEAINsmgiiCTECDe---ERLSVLHKHNIlpk-- 181  Schmidtea med...
XP_002608049 1771 TSMSTLAG-HQVTSLTIQGQEFYFLEEVAYEVYNHTvs--yVLNRCNCLQi---sRIRCKg---EYLEFLRPYCRfidr- 1840 Florida lancelet
XP_029186076  223 LNTNSANArCVIRTCLLDGEEIVCIPDLHKTVIDLFgqsvqVGNYMHRLKi---pTHRFSs---NCLKHLKAHNIlss-- 294  Acropora mill...
VDK81787       31 ATIYTYRG-KRIAGFELQGFRMICLPQIRALRSLGAiq--hGVNRCKLIS-----CKDFDqlydDCHKIHHRSGRpakrs 102  Onchocerca oc...
XP_002609855   12 VVPTEIGG-VELTGFRILDTEYVSLPEIRNKVLYKSpa--qIYNKQKQLNl----QSAFPvs-pRQFMILKERGAvdh-- 81   Florida lancelet
OAF69429      735 LNVSKIEA-CLLVSFSIGGEIRICFQQLLDTVLCQFnm-adVAAVCRILNit--iTNDCPk---IYLDLLKKLKIldp-- 805  Intoshia linei
Q1XH10          6 SGFEEVDG-VRLGYLIIKGKQMFALSQVFTDLLKNIpr-ttVHKRMDHLKv---kKHHCDl---EELRKLKAINSiaf-- 75   human
TMS40106       46 VVTHKFLD-KYVSGFEIDGEFRLCFNQFYSLFFGDLvl-edIVRAYADLRfn--nALADP----EQLLALKRASVvqp-- 115  Steinernema c...
3EQ5_A        101 ---------napSCGLITL--------------------------------TDAQRLCN 118  human
1L8R_A         79 ---------gvnRCKLISR--------------------------------KDFETLYN 96   human
CCD77600      268 ---------tvgSCGLIRK--------------------------------SDAERLTK 285  Schistosoma mansoni
CDS31401      218 ---------evtSCGLIRK--------------------------------SDAERMLK 235  Hymenolepis microstoma
Q2VWA4        111 ---------ssrRCGMITK--------------------------------REAERLCK 128  human
AQT19787      182 ---------qvtCCGLISQ--------------------------------SNAERMLK 199  Schmidtea mediterranea
XP_002608049 1841 ---------rsnHCYLIRG--------------------------------EDAELLHH 1858 Florida lancelet
XP_029186076  295 ---------katLCTYITK--------------------------------TDAERLLE 312  Acropora millepora
VDK81787      103 vdwenapcekskKQKYNSDrilvpltatqqivvqhlmataattitasesvrSDGKTMDN 161  Onchocerca ochengi
XP_002609855   82 ---------nakSCSMISK--------------------------------EDAEKLCQ 99   Florida lancelet
OAF69429      806 ---------dakNCVLLTL--------------------------------SQAEILSH 823  Intoshia linei
Q1XH10         76 ---------haaKCTLISR--------------------------------EDVEALYT 93   human
TMS40106      116 ---------taeECGLIQR--------------------------------SLAERLLN 133  Steinernema carpocapsae
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