Conserved Protein Domain Family
Rab11BD_RAB3IL1

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cd21069: Rab11BD_RAB3IL1 
Rab11 binding domain of Rab-3A-interacting-like protein 1 (RAB3IL1)
RAB3IL1, also called guanine nucleotide exchange factor for Rab-3A (GRAB), or Rab3A-interacting-like protein 1, or Rabin3-like 1, acts as a guanine nucleotide exchange factor (GEF) which promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form. As a dual Rab-binding protein, RAB3IL1 could potentially link Rab3 and Rab11 and/or Rab8 and Rab11-mediated intracellular trafficking processes. It may activate RAB3A, a GTPase that regulates synaptic vesicle exocytosis. It may also activate RAB8A and RAB8B. In addition, RAB3IL1 interacts with InsP6K1 and plays a role for InsP7 in vesicle exocytosis. The model corresponds to the Rab11a/Rab11b-binding region of RAB3IL1 lies within its carboxy-terminus, a region distinct from its GEF domain and Rab3a-binding region.
Statistics
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PSSM-Id: 411033
Aligned: 5 rows
Threshold Bit Score: 332.982
Created: 20-Dec-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative Rab11
Feature 1:putative Rab11 binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens RAB3IP (4UJ3; also called Rabin8) in complex with Rab11A and RAB11FIP3

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                  #######               
Q8TBN0       216 EGKEVDTILFAEFQAWRESPtLDKTCPFLERVYREDVGPCLDFTMQELSVLVRAAVEDNTLTIEPVASQTLPTVKVAevd 295 Homo sapiens
NP_001186568 210 ECKEVDSILFAEFQSWKESPtLDKSCSFLDRIYREDVGPCLDFTKQELSELVRVAVEQNTLTIEPVASQMLPVVKVSaed 289 chicken
XP_005988038  91 EKREVDAVLFSEFQAWKEEPtLERSCPFLDRIYQEDIGPCLSFAKRELADSVQSAVENNTLSIEPAAAQAIPVVKASaie 170 coelacanth
TDH09624      98 EDREMDSVLYAEFLMWKENPsVERSSAFLSRIYREDIGPCLSFTRSELSQLVQSAVENNSLTIEPVAMSALPMVKASaie 177 yellow perch
KAE8606930    89 ESKEVDTLLYSEFLAWKESPtLDRYCPFLSRIYLEDIKPCLDFAKRELSDQVLTAVEGNMLSVEPVVQPILPVVKASave 168 tropical clawed...
Feature 1                                                       #  ##  #   #    #####            
Q8TBN0       296 c--------sstnTCALSGLTRtCRHRIRLGDsKSHYYISPSSRARITAVCNFFTYIRYIQQGLVRQDAEPMFWEIMRLR 367 Homo sapiens
NP_001186568 290 s--------ggpkKCALSGLPRtCKHRIMLGDsGNYYYISPSCRARITAVCNFFTYIRYIQQGLVRQDVELMYWEVMRLR 361 chicken
XP_005988038 171 cggpngwraqiitKCALSGMSRaCKHRIKLGDsGNYYYISPSCRARITAVCNFFTYIRYIQQGLVRQDVEQMYWEVMRLR 250 coelacanth
TDH09624     178 c--------ggpkKCALSGISRlCRHRIKLGDkGSYYYISPSSRTRITAVCNFFTYIRYIQQGLVRHDAEQMFWEVMRLR 249 yellow perch
KAE8606930   169 r--------ggprKCALSGLSRsCRHRINLGDsGNYYFISPSCRYRITAVCNFFTYIRYIKQGLVRQDTELIFWEIMRLR 240 tropical clawed...
Feature 1                   
Q8TBN0       368 KEMSLAKLGFF 378 Homo sapiens
NP_001186568 362 REMSLAKLGFY 372 chicken
XP_005988038 251 KEMSIAKLGFY 261 coelacanth
TDH09624     250 REMTVAKLGFY 260 yellow perch
KAE8606930   241 REMSMAKLGFY 251 tropical clawed frog

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