1OKS,3BBZ,1R4G,1T6O,4HEO


Conserved Protein Domain Family
MEV_P-protein-C_like

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cd21031: MEV_P-protein-C_like 
C-terminal domain of Measles virus phosphoprotein and related proteins
This family includes the C-terminal domain of the P protein of plant viruses belonging to the Paramyxoviridae family such as measles virus and mumps virus. The family Paramyxoviridae belongs to the order Mononegavirales which are nonsegmented negative-stranded RNA viruses (NNVs). The genomes of NNVs are encapsidated by their nucleocapsid (N) proteins to form N-RNA complexes which serves as a template for transaction and replication. The C-terminus of P protein binds nucleocapsid. P protein plays multiple roles in transcription and translation, which include acting as a chaperone of nascent nucleoprotein (N), and as a cofactor of the viral polymerase (L) where P forms a two-subunit polymerase with a large catalytic subunit (L) and stabilizes the polymerase on its template of N-RNA. Paramyxoviruses have a polycistronic phosphoprotein (P) gene which encodes for proteins in addition to P protein; for example the measles virus P gene encodes for P protein and virulence factor V (MV-V). This domain family includes the unshared C-terminal domain of P protein not present in MV-V.
Statistics
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PSSM-Id: 411026
Aligned: 14 rows
Threshold Bit Score: 41.5363
Created: 17-Aug-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1OKS_A     2 ASRSVIRSIIKSsrleEDRKRYLXTLLDDIKGANDLAKFHQXLVKI 47  Measles morbillivirus
3BBZ_A     2 GQKVMITKMITDsvanPQMKQAFEQRLAKASTEDALNDIKRDIIRS 47  Mumps rubulavirus
1R4G_A     2 PTMHSLRLVIESsplsRAEKAAYVKSLSKCKTDQEVKAVMELVEED 47  Sendai virus (strain Harris)
1T6O_A     3 ASRSVIRSIIKSsrleEDRKRYLMTLLDDIKGANDLAKFHQMLMKI 48  Measles morbillivirus
P16595   344 GRKVMITKMITDcvanPQMKQVFEQRLAKASTEDALNDIKRDIIRS 389 Mumps virus Miyahara vaccine
Q9WMB4   459 ASRSVIRSIIKSsrleEDRKRYLMTLLDDIKGANDLAKFHQMLMKI 504 Measles virus strain Ichinose-B95a
Q9DLD6   350 VERDTVRALIMSrpmhPSSSAKLLSKLDAAGSIEEIRKIKRLALNG 395 Newcastle disease virus B1/48
CAA87687 459 PSRSVLRSMIKSsnleSEHKRSMIGLLNDVKSGKDLGEFYQMVKKI 504 Dolphin morbillivirus
Q9IK91   659 SSRDVIKTLIRThikdRELRSELIGYLNKAENDEEIQEIANTVNDI 704 Nipah henipavirus
P35939   459 PSKAVIASLIRSskvdQSHKQNMLSLLKNIKGDDNLNEFYQMIKSI 504 Phocine morbillivirus
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