6ISC,4FQP,4HZA


Conserved Protein Domain Family
IgV_1_Nectin-2_NecL-5_like_CD112_CD155

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cd20989: IgV_1_Nectin-2_NecL-5_like_CD112_CD155 
First immunoglobulin variable (IgV) domain of nectin-2, nectin-like protein 5, and similar domains
The members here are composed of the second immunoglobulin (Ig) domain of nectin-2 (also known as poliovirus receptor related protein 2 or Cluster of Differentiation 112 (CD112)), nectin-like protein 5 (CD155), and similar proteins. Nectins and Nectin-like molecules are a family of Ca(2+)-independent immunoglobulin-like transmembrane glycoproteins belonging to the class of adhesion receptors, consisting of nine members (nectins 1 through 4 and nectin-like proteins 1 through 5). Nectins are synaptic cell adhesion molecules (CAMs) which facilitate adhesion and signaling at various intracellular junctions. Nectins form homophilic cis-dimers, followed by homophilic and heterophilic trans-dimers involved in cell-cell adhesion. Nectin-2 and nectin-3 localize at Sertoli-spermatid junctions where they form heterophilic trans-interactions between the cells that are essential for the formation and maintenance of the junctions and for spermatid development. CD155 is the fifth member in the nectin-like molecule family, and functions as the receptor of poliovirus; therefore, CD155 is also referred to as Necl-5, or PVR. In contrast to all other family members, CD155 lacks self-adhesion capacity, yet it shares with nectins the feature to interact with other nectins. For instance, CD155 heterophilically trans-interacts with nectin-3, thereby contributing significantly to the establishment of adherens junctions between epithelial cells. This group belongs to the Constant 1 (C1)-set of IgSF domains, which has one beta-sheet that is formed by strands A-B-E-D and the other strands by G-F-C-C'.
Statistics
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PSSM-Id: 409581
Aligned: 7 rows
Threshold Bit Score: 192.409
Created: 27-Aug-2018
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:Ig strand A [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #####                                                                           
6ISC_B      2 VVVQAPTQVPGFLGDSVTLPCYLQVpnmevthVSQLTWARHg---eSGSMAVFHQTQGPSYSes----kRLEFVAArl-- 72  human
4FQP_A      2 VVVQAPTQVPGFLGDSVTLPCYLQVpnmevthVSQLTWARHg---eSGSMAVFHQTQGPSYSes----kRLEFVAArl-- 72  human
4HZA_A      4 VRVQVLPEVRGQLGGTVELPCHLLPpvp-glyISLVTWQRPdapanHQNVAAFHPKMGPSFPspkpgseRLSFVSAkqst 82  human
P15151     29 VVVQAPTQVPGFLGDSVTLPCYLQVpnmevthVSQLTWARHg---eSGSMAVFHQTQGPSYSes----kRLEFVAArl-- 99  human
Q92692     34 VRVQVLPEVRGQLGGTVELPCHLLPpvp-glyISLVTWQRPdapanHQNVAAFHPKMGPSFPspkpgseRLSFVSAkqst 112 human
P32507     34 VRVRVLPEVRGRLGGTVELPCHLLPptt--erVSQVTWQRLd----GTVVAAFHPSFGVDFPnsqfskdRLSFVRArpe- 106 house mouse
BAC37229   30 IRVLVPYNSTGVLGGSTTLHCSLTSnen--vtITQITWMKKdsggsHALVAVFHPKKGPNIKep----eRVKFLAAq--- 100 house mouse
Feature 1                                                   
6ISC_B     73 ----gAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114 human
4FQP_A     73 ----gAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114 human
4HZA_A     83 gqdteAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 human
P15151    100 ----gAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 141 human
Q92692    113 gqdteAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 158 human
P32507    107 ---tnADLRDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRV 149 house mouse
BAC37229  101 -----QDLRNASLAISNLSVEDEGIYECQIATFPRGSRSTNAWLKV 141 house mouse

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