Conserved Protein Domain Family
C1_Myosin-IXa

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cd20883: C1_Myosin-IXa 
protein kinase C conserved region 1 (C1 domain) found in unconventional myosin-IXa and similar proteins
Myosin-IXa, also called unconventional myosin-9a (Myo9a), is a single-headed, actin-dependent motor protein of the unconventional myosin IX class. It is expressed in several tissues and is enriched in the brain and testes. Myosin-IXa contains a Ras-associating (RA) domain, a motor domain, a protein kinase C conserved region 1 (C1), and a Rho GTPase activating domain (RhoGAP). Myosin-IXa binds the alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor (AMPAR) GluA2 subunit, and plays a key role in controlling the molecular structure and function of hippocampal synapses. Moreover, Myosin-IXa functions in epithelial cell morphology and differentiation, such that its knockout mice develop hydrocephalus and kidney dysfunction. Myosin-IXa regulates collective epithelial cell migration by targeting RhoGAP activity to cell-cell junctions. Myosin-IXa negatively regulates Rho GTPase signaling, and functions as a regulator of kidney tubule function. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410433
Aligned: 7 rows
Threshold Bit Score: 136.635
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on the structure evidence that Rattus norvegicus ROCK2 binds two Zn2+ ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #            #  #            #  #    #  #       #    
B2RTY4       1995 EEHNGHIFKATQYsIPTYCEYCSSLIWimDRASVCKLCKYACHKKCCLKTTAkCSKKY 2052 human
XP_014346729 1845 EEHNGHIFKSTQYsIPTYCEFCSSLIWmmERAYVCKLCKYACHKKCCLKTITkCSKKF 1902 coelacanth
E7F3F0       1755 EEHMGHIFKSTQYsIPTYCEFCSSLIWmmDKACVCKLCRYACHKKCCLRMTTkCSKKF 1812 zebrafish
E7EZG2       1986 EEHNGHIFKSTQYsIPTYCEYCSSLIWmmDKACVCKLCRYACHRKCCQKMTTkCSKKY 2043 zebrafish
XP_007906840 2169 EEYNGHVFKSTQYsIPTYCECCSSLIWmmDRAYVCKLCRYACHRKCCLKTTIkCSKKY 2226 elephant shark
KFP20040     2091 EEHNGHIFKATQYsIPTYCEYCSSLIWimDRASVCKLCKYACHKKCCLKTTAkCSKKY 2148 little egret
OCT87102     2009 EEHNGHIFKITQYnIPTYCEYCSSLIWimDRAAVCKLCRYACHKKCCSLINVaCNKKN 2066 African clawed frog

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