Conserved Protein Domain Family
C1_nPKC_epsilon-like_rpt2

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cd20838: C1_nPKC_epsilon-like_rpt2 
second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) epsilon, eta, and similar proteins
PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Members of this family contain two copies of C1 domain. This model corresponds to the second one. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410388
Aligned: 33 rows
Threshold Bit Score: 99.6534
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding siteputative DAG/PE
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on the structure evidence that Homo sapiens PKC-alpha binds two Zn2+ ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #            #  #             #    #    #  #       #   
P24723       244 IPHKFSIHNYKVPTFCDHCGSLLWGImRQGLQCKI--CKMNVHIRCQANVAPNCGVN 298 human
AVM85891     196 MPHQFEDHNYKIFTFCDHCGSLLWGLrKQGMRCKC--CKLNVHKRCKTKVANNCGIN 250 Oscarella lobularis
XP_026692264 232 VPHKFRPHNYPFFTFCDHCGSLLYGLySQGMQCKS--CKLNVHKRCAANIPNSCGIN 286 vase tunicate
ELU08618     240 VPHRFVVRHFMRFTFCDHCGSLIYGFfKQGLQCQV--CRMNIHKRCGKNVPNNCGIN 294 Capitella teleta
EGD78676     229 VPHRFKIHTYMRPTFCDHCGSLLWGLrRQGYQCQT--CKCNTHARCREHMPSNCGVD 283 Salpingoeca rosetta
EDQ88620     208 LPHRFKVHNYFRPTFCDHCGSLLWGLrHQGHRCQA--CGFNSHKRCLANVAHNCGVD 262 Monosiga brevicollis MX1
PIO70812      78 EEHHFTLRNYHRPTFCDHCGSMLFGLvKQGFHCSG--CKMNVHKRCKVNVPKNCGIG 132 Teladorsagia circumcincta
XP_030536412 193 IPHTFKEHSFKKLTFCDHCGSLLYGLyKQGLLCVHehCGISIHYKCRKNVPNNCGVD 249 Rhodamnia argentea
EDV21777     100 VPHNFATHSYRSPAFCDHCGSLLYGLfRQGKQCKE--CKRNVHFRCIQYVPNDCGIN 154 Trichoplax adhaerens
CAA72926     242 IPHKFLTHSYRFPTFCQHCGSLLYGIiKQGVQCKN--CALNVHRRCQANVANDCGVD 296 Hydra vulgaris

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