Conserved Protein Domain Family
C1_nPKC_epsilon-like_rpt1

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cd20835: C1_nPKC_epsilon-like_rpt1 
first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) epsilon, eta, and similar proteins
PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domains. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Members of this family contain two copies of the C1 domain. This model corresponds to the first one. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410385
Aligned: 25 rows
Threshold Bit Score: 137.598
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding siteputative DAG/PE
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on the structure evidence that Homo sapiens PKC-gamma binds two Zn2+ ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #            #  #              #  #    #  #       #    
P24723       163 RRRVHQINGHKFMATYLRQPTYCSHCREFIWGVfgKQGYQCQVCTCVVHKRCHHLIVTACTCQN 226 human
P34885       162 RRKIHEVTGHKFMALFLRQPTFCAHCKEFIWGIg-KQGYQCQICTVVVHKRCHEDVVWKCPGNK 224 Caenorhabditis elegans
PIK52502     165 RRRVHQVNGHKFMSTSLRQPTYCAHCKDFIWGLm-KQAYQCQVCTLVVHKRCHVGVVTKCPGHF 227 Japanese sea cucumber
CAA72926     164 RRRIHQIGGHKFMATYLRQFTFCSHCKEFIWGVigKQGYQCQVCSIVTHKKCHHLIVSKCPGVK 227 Hydra vulgaris
NP_001085794 158 RRRVHQVNGHKFMATYLKQPTYCSHCKDFIWGVfgKQGYQCQVCTCVVHKRCHQLIVTACTCKS 221 African clawed frog
XP_007902028 165 RRKVHEVNNHKFMATYLKQPTYCSHCKEFIWGVfgKQGYQCQVCTCVVHKRCHQLIVTACPRIK 228 elephant shark
NP_001116528 160 RRKIHQVNGHKFMSTFLKQPTFCFHCKEFIWGVfgKQGYQCQVCTCVVHKRCHQLVVTVCPRMK 223 zebrafish
XP_014340502 161 RRRIHQVNGHKFMATFLRQPTYCSHCKDFIWGVfgKQGYQCQVCTCVVHKRCHQLVVTVCPRIK 224 coelacanth
XP_015721279 292 RRRVHQVNGHKFMATYLRQPTYCSHCKEFIWGVfgKQGYQCQVCTCVVHKRCHHLIVTACTCQN 355 Japanese quail
AVM85891     114 RRKIHAVNGHKFMATYLRQPTYCSHCSDFIWGLvnKQGYQCQVCLAVVHKRCHQLVVSTCTGQK 177 Oscarella lobularis

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