4L9M


Conserved Protein Domain Family
C1_RASGRP

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cd20808: C1_RASGRP 
protein kinase C conserved region 1 (C1 domain) found in the RAS guanyl-releasing protein (RASGRP) family
The RASGRP family includes RASGRP1-4. They function as cation-, usually calcium-, and diacylglycerol (DAG)-regulated nucleotide exchange factor activating Ras through the exchange of bound GDP for GTP. RASGRP1, also called calcium and DAG-regulated guanine nucleotide exchange factor II (CalDAG-GEFII) or Ras guanyl-releasing protein, activates the Erk/MAP kinase cascade and regulates T-cell/B-cell development, homeostasis and differentiation by coupling T-lymphocyte/B-lymphocyte antigen receptors to Ras. RASGRP1 also regulates NK cell cytotoxicity and ITAM-dependent cytokine production by activation of Ras-mediated ERK and JNK pathways. RASGRP2, also called calcium and DAG-regulated guanine nucleotide exchange factor I (CalDAG-GEFI), Cdc25-like protein (CDC25L), or F25B3.3 kinase-like protein, specifically activates Rap and may also activate other GTPases such as RRAS, RRAS2, NRAS, KRAS but not HRAS. RASGRP2 is involved in aggregation of platelets and adhesion of T-lymphocytes and neutrophils probably through inside-out integrin activation, as well as in the muscarinic acetylcholine receptor M1/CHRM1 signaling pathway. RASGRP3, also called calcium and DAG-regulated guanine nucleotide exchange factor III (CalDAG-GEFIII), or guanine nucleotide exchange factor for Rap1, is a guanine nucleotide-exchange factor activating H-Ras, R-Ras and Ras-associated protein-1/2. It functions as an important mediator of signaling downstream from receptor coupled phosphoinositide turnover in B and T cells. RASGRP4 may function in mast cell differentiation. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410358
Aligned: 21 rows
Threshold Bit Score: 96.6375
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Structure:4L9M; Homo sapiens RASGRP1 binds two Zn2+ ions.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #            #  #             #  #    #  #       # 
4L9M_A       493 PHNFQETTYlkPTFCDNCAGFLWGvikQGYRCKdCGMNCHkqCKDLVvfECK 544  human
Q8IV61       494 IHNFQEMTYlkPTFCEHCAGFLWGiikQGYKCKdCGANCHkqCKDLLvlACR 545  human
Q8TDF6       540 LHTFHEVTFrkPTFCDSCSGFLWGvtkQGYRCReCGLCCHkhCRDQVkvECK 591  human
KXJ27979     498 SHNFQETTYfsTTFCHHCGGVLRGiikQGYRCKgCHVNCHksCKKLIvtECR 549  Exaiptasia pallida
XP_003385782 313 KHNFVEHTFigTQYCQHCKGVLKGivrQGVRCKdCGISCHkhCKDYVvvDCS 364  Amphimedon queenslandica
Q7LDG7       498 VHNFQESNSlrPVACRHCKALILGiykQGLKCRaCGVNCHkqCKDRLsvECR 549  human
XP_018666896 520 KHDFVETTYfhPTFCEECEKLLWGlvkQGWKCKgCGINCHkhCKERIvqECR 571  vase tunicate
XP_002596752 505 RHDFVETTYfkPTYCEHCSGLLWGlikQGWKCRdCAISCHkhCKELVvvECR 556  Florida lancelet
EFX85085     489 RHDFQETNSfrPCTCAHCNGLLWGplrQGYKCReCGLTAHkmCKDVMtvTCR 540  common water flea
NP_001263842 492 KHNFHETTFltPTTCNHCNKLLWGilrQGFKCKdCGLAVHscCKSNAvaECR 543  Caenorhabditis elegans

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