3CXL,1XA6


Conserved Protein Domain Family
C1_CHN

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cd20806: C1_CHN 
protein kinase C conserved region 1 (C1 domain) found in the chimaerin family
Chimaerins are a family of phorbolester- and diacylglycerol-responsive GTPase activating proteins (GAPs) specific for the Rho-like GTPase Rac. Alpha1-chimerin (formerly known as N-chimerin) and alpha2-chimerin are alternatively spliced products of a single gene, as are beta1- and beta2-chimerin. Alpha1- and beta1-chimerin have a relatively short N-terminal region that does not encode any recognizable domains, whereas alpha2- and beta2-chimerin both include a functional SH2 domain that can bind to phosphotyrosine motifs within receptors. All the isoforms contain a GAP domain with specificity in vitro for Rac1 and a diacylglycerol (DAG)-binding C1 domain which allows them to translocate to membranes in response to DAG signaling and anchors them in close proximity to activated Rac. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410356
Aligned: 22 rows
Threshold Bit Score: 92.7572
Created: 4-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative DAG/PE
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Structure:1XA6; Homo sapiens beta2-chimaerin binds two Zn2+ ions.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #            #  #             #  #    #    #         #  
3CXL_A       209 IHNFKVHTFRGPHWCEYCANFMWGLiaQGVKCADCGLNVHk--QCSKMVp--nDCKP 261 human
XP_003385452 314 PHNFKIHTFLNMPWCDFCHNFLWGLrsQGYKCKDCGYVAHk--QCKDCTg--dDCAP 366 Amphimedon queenslandica
1XA6_A       212 THNFKVHTFRGPHWCEYCANFMWGLiaQGVRCSDCGLNVHk--QCSKHVp--nDCQP 264 human
NP_497323    171 AHNFTSYTFKAPHYCDYCRNFLWGLvhQGMRCEDCGFAAHk--KCSEKTl--hDCVP 223 Caenorhabditis elegans
RMX45523     225 KHNFKIHTFKGPHWCDSCRNFLWGLimQGIRCQDCGFNAHk--QCGEVVr--eDCQP 277 Pocillopora damicornis
EFX86526      44 AHDFRIQNFKGLHWCDFCGNFMWGIiaQGVRCEDCGISAHr--KCSEKIp--aDCCP 96  common water flea
NP_727007    241 PHHFKVHTFKGLNWCEFCANFLWGFtaQGVKCEACGFVAHs--KCSELVp--pKCVP 293 fruit fly
PFX30331     172 PHVFKPHSYKHFKWCASCGGFMWGIkdQGMKCEGCGLDVHcrdRCMKNVe--gECPL 226 Stylophora pistillata
XP_011403146 367 PHNFSLTTYRRATWCDLCHHFMWGLvhQGMSCQDCGINIHk--QCHEAAlshsDCIP 421 Amphimedon queenslandica
XP_012554315 154 PHSFKMVSYKYPRWCDNCHQFLWGFfhQGLKCEDCDMNVHk--TCQDNAs--lPCSK 206 Hydra vulgaris

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