Conserved Protein Domain Family
C1_DGK_typeIV_rpt1

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cd20802: C1_DGK_typeIV_rpt1 
first protein kinase C conserved region 1 (C1 domain) found in type IV diacylglycerol kinases
Diacylglycerol (DAG) kinase (EC 2.7.1.107) is a lipid kinase that phosphorylates diacylglycerol to form phosphatidic acid. Type IV DAG kinases (DGKs) contain myristoylated alanine-rich protein kinase C substrate (MARCKS), PDZ-binding, and ankyrin domains, in addition to C1 and catalytic domains that are present in all DGKs. The MARCKS domain regulates the nuclear localizations of type IV DGKs while the PDZ-binding and ankyrin domains regulate interactions with several proteins. Two DGK isozymes (zeta and iota) are classified as type IV. DAG kinase zeta, also called diglyceride kinase zeta (DGK-zeta), displays a strong preference for 1,2-diacylglycerols over 1,3-diacylglycerols, but lacks substrate specificity among molecular species of long chain diacylglycerols. DAG kinase iota, also called diglyceride kinase iota (DGK-iota), or DGKI, is a homolog of Drosophila DGK2, RdgA. It may have important cellular functions in the retina and brain. Members of this family contain two copies of the C1 domain. This model corresponds to the first one. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410352
Aligned: 33 rows
Threshold Bit Score: 79.2621
Created: 1-Nov-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on the structure evidence that Homo sapiens DGKdelta binds two Zn2+ ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #                #         #              #  #    #  #           #      
Q13574        282 ATYGEHIWFETNVs-----GDFCYVg---eQYCVARMLks--vsRRKCAACKIVVHTPCIEQLEKin-frCKPSFRE 347  human
NP_001188565  587 AVQGEHYWKPTSAs-----GDLCCLn----EECIKSGQ------RMKCSACQLVAHHNCIPFVNEkstlaCKPTYRD 648  fruit fly
NP_001355417  431 ILPSEHVWLPSSTgssasaDSECYVg---eKDCRRSGE------KRRCAACHIVAHTNCFSLLAKln-lnCKTTFRD 497  Caenorhabditis e...
XP_019848920  141 AEDNCHLWVERDT------REACYLnd--tQYCQDQKIvhpkrqKVRCSACRILVHTTCMKQLCYeg-vfCKSTFRE 208  Amphimedon queen...
XP_012565282  118 AVNGTHIWHDTST------SGGCML-----QDCRKSGP------KKRCTACKFVAHKKCAENQNMlnlpkCRSTYRE 177  Hydra vulgaris
RDD41155      104 AESGTHIWIDYDS------GHNCYMndidnEHCQKSNL------RKRCVACKIVTHVDCIPMLYKnd-iyCRPTFYD 167  Trichoplax sp. H2
XP_023345984   93 ASPNAHIFVPTSGs-----VQSCYLa----QDCLHSGM------KFKCVACRTIAHQGCISALNSvf--pCKLTFRE 152  Eurytemora affinis
CBY36881       88 AEPDAHLWTECDSs-----NDSCYLks--qPDCKSRSSs----sRERCNACRIAVHTSCKSRIVKt---kCRVTFDD 150  Oikopleura dioica
XP_014279423   20 AEPGGHLWSSVSN------ATECYVp---dEHCVKRGS------KQKCSACHIVAHGDCVPLVVSkmkwhCRLTFRD 81   brown marmorated...
KFD58731      123 CHPDDHLWDTVTG------SAECYVg---eKDCRSAGS------KLKCCACHLIAHEACLPVLPKkn-lkCKSTYTD 183  pig whipworm

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