6JM5


Conserved Protein Domain Family
TBC1D23_C-like

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cd20788: TBC1D23_C-like 
C-terminal domain of TBC1 domain family member 23, and similar proteins
This family contains the C-terminal domain of Tre2-Bub2-Cdc16 (TBC) family 23 (TBC1D23), which adopts a Pleckstrin homology (PH) domain fold. It selectively binds to phosphoinositides, in particular, PtdIns(4)P, through one surface while it binds FAM21 via the opposite surface. TBC1D23, which is highly conserved in many eukaryotes but missing in plants and fungi, also possesses an N-terminal domain which is a catalytically inactive TBC domain. TBC1D23 encodes a protein functioning in endosome-to-Golgi trafficking in cells; it is a specificity determinant that links the vesicle to the target membrane. Homozygous mutations of TBC1D23 have been found in patients diagnosed with pontocerebellar hypoplasia (PCH), a group of neurological disorders that affect the brain development, particularly, the pons and cerebellum. Mutation of key residues of TBC1D23 (or FAM21) selectively disrupts the endosomal vesicular trafficking toward the Trans-Golgi Network. This C-terminal domain is missing in some PCH patients.
Links
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Statistics
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PSSM-Id: 412053
Aligned: 94 rows
Threshold Bit Score: 69.5723
Created: 30-Sep-2020
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6JM5_A         3 VNIQTWINkpdvKHHFPCKEVKes-gHMFPSHLLVTa-tHMYCLREivsr------------------------------ 50  human
VDN13256     242 VDFQACKQmpevKKYFECRLLDat-sQLSDNGLILLlerQFIVIQEr--------------------------------- 287 Dibothriocephal...
TGZ58126     736 IDTTQWSSrpevRGVFECQLIDssgrLSSEGCLVLAe-rHMLVLRNqttrstaqlvssigsaiqs------vltrstesp 808 Opisthorchis fe...
KAA3680180   745 IDATQWSCrpevRGVFGCQLIGhagrFSDTGFLVLVe-rHLLLLRDhvhrspvrlvasigsaiq--------svlsrsst 815 Paragonimus wes...
VDM05663     335 VDFQACRQmsevKKYFECRLLDas-nQLSDNGLILLlerQFVVVQErrqvladtiatlnhfvqgaf----vkrlaaktgs 409 Schistocephalus...
RTG88116     676 IDTTRWSRrpevRGVFSTRFIRpn-gQLGDSGLLVLaerHLILLRHptprlpnqlinslsstlqsvfnkknpksseysai 754 Schistosoma bovis
CDS25688     664 INLQSCSTmpgvKQSFDCTLIGfdemPSFKGVILLLe-rSMVVVRErekqflealsnlmqktf----------lkkssap 732 Hymenolepis mic...
CDS37057     669 IDLEGCRRmpgvTNSFDCVLLGrgemPSYRGIILVTv-kHMIVVRErdkplletlgnfvqrtflr------kataskaas 741 Echinococcus mu...
VDD76680     636 IDFNDCRKmpevNSSFICRLFSpngsLSNRGILLLLe-eDIVLVKErekqlleslgnfvqktfhkk----snsasknvsg 710 Mesocestoides c...
XP_014152523 247 INIEDNMDdigaISSFQCEEMApr-nRRIASVLVVSe-sAFYVLRTpaqt------------------------------ 294 Sphaeroforma ar...
6JM5_A        51 ------kglAYIQSRQaln-svVKITSKKkhpeLITFKYGNssa-------sgiEILAIERYLipnAGDATKAIKQQIMK 116 human
VDN13256     288 ---------RQVLADT------IATLNHLrvpeLITFHFSRtdd-------llsDSLGFVRVYihkAGDAVKAIKLAVFN 345 Dibothriocephal...
TGZ58126     809 pfqstkrprHAVVLRSvplgliTRITANKrlpeCITFHYSGidsadl-lrlneqTLGARDRLFipkAGEAVRMIKLAIVN 887 Opisthorchis fe...
KAA3680180   816 dkgskpstkHAVVLRSvpldliTRITSNKrlpeCITFHYSSadpsdl-lrlnepVMGTRDRLYipqAGDAVRMIKMAICH 894 Paragonimus wes...
VDM05663     410 shptevkqdGRIVASIpfn-smVRITSNKrvpeLITFHFSRtdd-------llsESLEFVRVYihkAGDAVKAIKLAVFN 481 Schistocephalus...
RTG88116     755 qkpttdlpkYAVVYRSiplsmvVKITSNRrfpeCITFHYCPhdegdmlklndqsLFSMKDRLYinkAGEAVKMVKTAIFT 834 Schistosoma bovis
CDS25688     733 tendksaldGVIEVVFplt-hiTKITSKKitpeIITFHCIRpged------lvsETQEAIRLLipkAGDAVKVIKAAVFS 805 Hymenolepis mic...
CDS37057     742 saetersvdGVVEVSFplg-qlTKITSKKitpeVITFHCISdp---------vlGTREFIRLYipkAGDAVKVIKTAVFN 811 Echinococcus mu...
VDD76680     711 sggperntdGLIEFALplv-slKKITSNKlipeVITFHFSRated------fvsETLEAVRLHipeAGDAVKAIKLAVYR 783 Mesocestoides c...
XP_014152523 295 ------hpvAYVKESFplw-tlTKITANKkdadLLTFVFKIerd--------giQTTQPRRFLlknSRTVSQTIGKLVLA 359 Sphaeroforma ar...
6JM5_A       117 V 117 human
VDN13256     346 V 346 Dibothriocephalus latus
TGZ58126     888 V 888 Opisthorchis felineus
KAA3680180   895 T 895 Paragonimus westermani
VDM05663     482 V 482 Schistocephalus solidus
RTG88116     835 T 835 Schistosoma bovis
CDS25688     806 T 806 Hymenolepis microstoma
CDS37057     812 N 812 Echinococcus multilocularis
VDD76680     784 A 784 Mesocestoides corti
XP_014152523 360 N 360 Sphaeroforma arctica JP610
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