2JE2,6E17,6AMG,6E0X,6E0Y


Conserved Protein Domain Family
cyt_P460_Ne-like

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cd20751: cyt_P460_Ne-like 
cytochrome P460 from Nitrosomonas europaea and similar proteins
Cytochrome (cyt) P460 is a small soluble periplasmic protein that binds the c-type heme cofactor, heme P460, named for its characteristic ferrous Soret peak maximum at 460 nm, which has the distinction of being the only known heme in biology to withdraw electrons from an iron coordinated substrate. The heme P460 in N. europea cyt P460 contains a third proteinaceous cross-link, similar to that found in hydroxylamine oxidoreductase (HAO), but in this case, the cross-link is to a conserved lysine residue, K70. The biological function of cyt P460 is yet to be determined, but it binds hydroxylamine, hydrazine, hydrogen peroxide, and cyanide in the ferric form, and CO in the ferrous form; it also possesses a weak hydroxylamine oxidation/cyt c reduction activity. It belongs to a family, called the cytochrome P460 family, of small mono-heme c-type cytochromes that are predominantly of beta-sheet structure, as opposed to the four elongate, tightly-packed alpha-helices of the widely distributed cytochromes c' of photoheterotrophic and denitrifying bacteria.
Statistics
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PSSM-Id: 410958
Aligned: 154 rows
Threshold Bit Score: 146.921
Created: 19-Sep-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heme bindinghomodimer
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                     #                            # #                   
2JE2_A         3 GVAEFNd----kGELLLPKNYREWVMVGTQVTPnelndg------------kapfteIRTVYVDPESYAHWKkTGEFRDG 66  Nitrosomonas eu...
PYV23612      47 AGPRFAg----gNQLVRPEGYRQWVFVGSSLGMsynegq------------agdapeFHNVYIQPEAYRQFAeTGKFPDQ 110 Acidobacteria b...
WP_083713047  35 TKPTYNa----nGELVAPEGFRSWVFVGADLGPsyrsnpdepakqgkpehdatvggnFHNVYINPESYRAYReTGEFPDP 110 Paludisphaera b...
TIX69350      28 IGPVYDg----nGQLLLPKGYETWVFAGSNLGLayndsiaamta---leaeragsklFHNVYIDPASYTAFAkTGEFPDP 100 Mesorhizobium sp.
WP_108882003  42 FVPQYDk----sGRLKVPTGYETWVFVGSNIGLgyaaelpamta---keakrvetgsFHNIYINPAAHQHFIeTGEFPDP 114 Anderseniella s...
RLS26788      61 SGPVYTa----tGELVAPRGFRTWVFAGSDLSPvyrrelpggaa--riereekipgsFHNIYINPEAYRTYLaTKKFPDR 134 Planctomycetes ...
PYV07854      43 SEPRFEe----gNQLIRPEGYREWVFVGSGLGMsynegp------------pdkaphFTNIYLEPHAYRHFLeTGKFPDK 106 Acidobacteria b...
WP_130696994  21 YQPSYEr----dGRLILPKGYETWVFVGSNFGLaynpdvvaita---levqrgeqrlFHNIYIEPSAFAQFIkTGEFPDP 93  Rhizobium legum...
WP_145424345  39 YIPQYTd----gGELKLPSKFREWIFVGAALGLrysehgp-----------yedeekFTNVYITPPAYAQFQrTGTFPEK 103 Planctomycetes ...
WP_023685862  34 DPSEFTptyeenGQLKVPEGFDTWVFVGSNLGLsyknnlaamts---leaeravealFHNVYLDPHAYKVFVeTGEFADP 110 Mesorhizobium s...
Feature 1          # #                           ###                 ##                 #   ##  #
2JE2_A        67 TVTVKELVSVgdrk--gpgsGNGYFMGdYIGLEASVKDsqrf--anepGNWAFYIFYvpdt--plvaAAKNLPTAECAAC 140 Nitrosomonas eu...
PYV23612     111 TVLVMEVLSAggna---sinKRGQFEDrFIGIEAAVKDekr-----fpEKWAYFDFIgasg--qalaRAKPFPKEACWQC 180 Acidobacteria b...
WP_083713047 111 TMLVLEVFRGetrda-kgvlERGWFEGkRVGVEVAVKDknrp---gggVPWAYYDFRlddks-kpstPTAAKPDASCYQC 185 Paludisphaera b...
TIX69350     101 TVLVMENYSAeakdv-ggllNDGVFNGsRIRTEVAVKDshrptrpdslETWAYYVFPadgsg-qpaqAASAFPDAVCHAC 178 Mesorhizobium sp.
WP_108882003 115 TVLVMEHYEAkgkqp-egilDKGVFNGaRSGFEVAVKNparp--dgskTPWAYYIFTdrkdpsqvkpVAKAFPDAACFSC 191 Anderseniella s...
RLS26788     135 TMLVMEIFSAgtkde-kdflTGGKFEDqRSGFEVAVKDknrp---gggVPWAYYNFKlegkl-gpvkPAKANPDSKCYDC 209 Planctomycetes ...
PYV07854     107 TVLVMEVVTAgsra---sinQQGHFEDsFIGVEAAVKDekr-----fpEKWAYFNFIgsgg--kaldRASPFPKEACWSC 176 Acidobacteria b...
WP_130696994  94 TVFVMESYTAgskdp-ggilNDGFFNAdRSRVEAAVKDshrpgrseadKVWAYYSFAtdrag-qpatAAPAFPDQACHAC 171 Rhizobium legum...
WP_145424345 104 TMLAMAVYRQgkkkplgkrkLQGAFEGeFLAVELAVKDran-----skDAWTYFDFSpqegqtalrkSAKAFATNKCFDC 178 Planctomycetes ...
WP_023685862 111 TTLVMEIFAAadrep-kgvlAAGQYNGdFRGLQVAVKDlsrpgrqpsgSAWAYYVFNngam---vlpSAPAFPDVACANC 186 Mesorhizobium s...
Feature 1        #       ###  ##  
2JE2_A       141 HKENaktDMVFTQFYPV 157 Nitrosomonas europaea
PYV23612     181 HNQHgaaDNVFVQFYPV 197 Acidobacteria bacterium
WP_083713047 186 HLKHasvDNVWVQFYPT 202 Paludisphaera borealis
TIX69350     179 HKLHaghDNVWTQFYPL 195 Mesorhizobium sp.
WP_108882003 192 HEKHastDNVWVQFYPV 208 Anderseniella sp. Alg231-50
RLS26788     210 HLKHagdDNVWVQFYPA 226 Planctomycetes bacterium
PYV07854     177 HHEHgevDNVFVQFYPV 193 Acidobacteria bacterium
WP_130696994 172 HEMHaghDNVWVQFYPK 188 Rhizobium leguminosarum
WP_145424345 179 HAEHgavDNVFVQYYPS 195 Planctomycetes bacterium Pan258
WP_023685862 187 HKAHaskDNVWVQFYPT 203 Mesorhizobium sp. LSJC277A00

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