Conserved Protein Domain Family
CYCLIN_SDS-like_rpt2

?
cd20721: CYCLIN_SDS-like_rpt2 
second cyclin box found in Arabidopsis thaliana cyclin-SDS and similar proteins
Cyclin-SDS, also called protein SOLO DANCERS, is a meiosis-specific cyclin that is required for normal homolog synapsis and recombination in early to mid-prophase 1. It contains two cyclin boxes. This model corresponds to the second one. The cyclin box is a protein binding domain.
Statistics
?
PSSM-Id: 410310
Aligned: 7 rows
Threshold Bit Score: 80.2496
Created: 18-Sep-2019
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q1PFW3   488 PTIFNFLWFYLKAar----------------------------------anPEVERKAKSLAVTSLSDqtqlcFWPSTVA 533 thale cress
PNW82691 207 PNSLVFLRQYHNAllyedgvv-----------------------padvasmAAFKTCANFLAELSLLYdaflpYGYSTVA 263 Chlamydomonas reinh...
CEO96238 136 PSILEFAAMYAEVsdllsg---------------------------rahasRDLERRQTRLARVALMHyefnqWSASVVG 188 Plasmodiophora bras...
KXZ46025 293 PTAATFIPYYIACavrerskarsaaagtdspwgsdaaplpdsafraaaeglRPLAGLAMQLAEITLLCnsfmsYDASTIA 372 Gonium pectorale
RYE99417 164 PTAYTFVTHYIERls----------------------------------lpRTQALYVHFVCECMLQHysmlaWRPSVLA 209 Euryarchaeota archaeon
GBF93495 231 PTVETFLRAALPRlcgvpasgg---------------------appasdaaRALCSLSMLLGQQSLLEsqlleFRPSVVA 289 Raphidocelis subcap...
OHT16779 188 PNVGDFINLLEENls----------------------------------cdRPLLMLLWTLSDILLQFagflrFRPSTIA 233 Tritrichomonas foetus
Q1PFW3   534 AALVVLACIehnkisayq-------------------rvikvhvrtTDNELPECVk---------------SLDWLLGQ 578 thale cress
PNW82691 264 TACLVLAEWtvkgnagpaassqagsaapairtvaaltelagvdvaaLAPNLAPCVe---------------ALHQLYAQ 327 Chlamydomonas reinha...
CEO96238 189 ACVVQAARImsdlppvw----------------------ascskhsRSDDLRRCVq---------------LLFQVYKQ 230 Plasmodiophora brass...
KXZ46025 373 LACVALAEHlmppaqpagaaaggtvv----savvsaclaaglplqvLAPSVHQCAa---------------ALEYCHGQ 432 Gonium pectorale
RYE99417 210 AAALVVGSAmhnrhahepvev-------------lsaelvasltntSLAEVSACCd---------------AMLAIVEK 260 Euryarchaeota archaeon
GBF93495 290 AACLAYAHVllgrpladaalaga---------agccvgagaaaevsRAADVLRAVhaavavaaasgnpyacSLRWLALD 359 Raphidocelis subcapi...
OHT16779 234 TAVLIYSLNclnrtfqne--------------------ivtklmttEEPEVLFCCi--------------eEIHNVVTD 278 Tritrichomonas foetus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap