Conserved Protein Domain Family
MIX_II

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cd20706: MIX_II 
Marker for type sIX effectors domain, clan II
This subfamily contains the MIX (Marker for type sIX effectors) II clan (MIX II) domain. MIX is a marker of type VI secretion system (T6SS) effectors carrying polymorphic C-terminal toxins. Predicted activity of the C-terminal toxin domains of Vibrionaceae MIX II effectors is mainly pore-forming. Notably, many toxins identified as T6SS effectors do not contain a recognizable delivery domain or signal, suggesting that additional delivery domains may exist. Also, some of these MIX II effectors also contain N-terminal domains such as the T6SS-secreted tail component PAAR.
Statistics
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PSSM-Id: 410947
Aligned: 53 rows
Threshold Bit Score: 106.656
Created: 14-Aug-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_094789851  384 PIDTKVTAIYPVRFAYANFFeeslekaaeppsi---ntmmgastiadgKGYVIRLl-RQGWVYIREEddsanGHFHIFKY 459  Zooshikella g...
AIO29399       26 PPCEHGIPVYPLRYGVADAPchastglss-----------pypvlsagKQQGLRMlrPGCYLYVRYLk---hGRMWTRQY 91   Burkholderia ...
WP_038412038   26 PPCEPSIPLYPLRYGIVDTPlepsifptlc--------tdgypalgsgKAYGLRLlrPGSYVYLCYFk---dGRMWTQHY 94   Pseudomonas c...
WP_061176811   14 SACAPHIPIIPVRYAVIPKNpgdtaqfayadapyplekgftgianlncSKYTLRLl-RPGYVYVFMEsp-qaRKLVIHEH 91   Caballeronia ...
WP_063952036   12 ESCKARIPLFPLRYSAHPRPkggadyaydap------sletgfqkldhAQYGLRCv-GAGFVYLFDEt---eGTVFVWRV 81   Achromobacter...
WP_063953741   29 PPCERGVPLYPLRYGIADYAwdremfprln--------tegypaltagKAYGLRTlrPGTYVYLFHFe---nGRMWTQHY 97   Achromobacter
WP_078468964   12 ESCQARIPLFPLRYSAHPRPkggadyaydep------tlakgfkkldhAQYGLRCv-GGGFIYLFDEt---eGKVYVWRV 81   Pseudomonas s...
WP_097058537   41 PEPQQARILYPVRYGITRAPfpagdfpdmd--------lsgyeglgegWHFGLRTlrPLTYVYLLAQvk-eeWRIRVWQV 111  Alcanivorax x...
WP_110198870   20 AQCAGTIPIIPVRYAIVPRKddsqpdylyadkdc-gahleqgfeklsrSIYTVRAl-RPGYIYLYDEt---kGTLFIWEA 94   Kangiella spo...
WP_146040505   26 LPCQRCIPIYPLRYAISDTPlgkvsgklst---------agypklkgaKHYGLRVlrPGKYVYLFYFk---nGRMWTQHY 93   Pseudomonas s...
WP_094789851  460 tktEENGTVKEQfdkylfknklnaqgglvydssgsengYPFIFVKRSl------kEVSIAYSEHEWHADVIDKMNGQLDA 533  Zooshikella g...
AIO29399       92 s-vTENGRFTALwwtekdyrnefp---grharidggadRPYVLIPKEqa----sgPVWLMVSDSVLSHRALCEMERDSAR 163  Burkholderia ...
WP_038412038   95 q-vTEDIRFARIwwdrcdetnatp---grqcvpethqaRPYLQAPQShi----aeQVYVMISDTLLSHRALWAIETNQDG 166  Pseudomonas c...
WP_061176811   92 ---VGGGHYRELlikdleaygkgk--kdkkrvyaegarTINVWADLSa------tQVWIGYSAHLWTATQAQRIESSEDE 160  Caballeronia ...
WP_063952036   82 n--EETGQFIELlsrhrsleaa-------lggykpgrsLPHIWANERs-------VVHILLTDTLLTERKIREIESDQDS 145  Achromobacter...
WP_063953741   98 q-vTEDVRFARIwwsdadeddatp---grlsrpdtvgaQAYLFAPDAkt----aeTVHILVSDTLLSHRTLWAIETNDGG 169  Achromobacter
WP_078468964   82 n--EENGQFIELlskhrsleaa-------iegyrpgksVPHIWAKECs-------VVHILLTDTLLTERKIRDIESDRDG 145  Pseudomonas s...
WP_097058537  112 ---AEDGYFNPIssvsteeasqppw-qdmptlpevtaaLPYITAPLPtpeldvgeRAWLLVSDSRLTRGVLDALTSDQDG 187  Alcanivorax x...
WP_110198870   95 ---DGKGNYTEMrytslenyqk-------pdnlsagrtLKNVWAFEDs------dTVHIGFTTNLLTQKMVLKVEQDSAF 158  Kangiella spo...
WP_146040505   94 l-vTDDGRFASFwwsekdendpip---gsharpdifgaTAYIPAPESrt----adTVWVLVSEIMLSHCTLWKIEQDTHQ 165  Pseudomonas s...
WP_094789851  534 RKKAMQ 539  Zooshikella ganghwensis
AIO29399      164 RDLLMR 169  Burkholderia cepacia ATCC 25416
WP_038412038  167 LRDTLA 172  Pseudomonas cremoricolorata
WP_061176811  161 RALCMH 166  Caballeronia pedi
WP_063952036  146 IRAKLA 151  Achromobacter xylosoxidans
WP_063953741  170 LRDALS 175  Achromobacter
WP_078468964  146 VRTKLA 151  Pseudomonas sp. MF4836
WP_097058537  188 LRSQLA 193  Alcanivorax xenomutans
WP_110198870  159 RSKFMH 164  Kangiella spongicola
WP_146040505  166 LRSRLA 171  Pseudomonas sp. FW104-15G4B
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