Conserved Protein Domain Family
CYP1D1

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cd20677: CYP1D1 
cytochrome P450 family 1, subfamily D, polypeptide 1
The cytochrome P450 1D1 (CYP1D1) gene is pseudogenized in humans because of five nonsense mutations in the putative coding region. However, in other organisms including cynomolgus monkey, CYP1D1 is a functional drug-metabolizing enzyme that is highly expressed in the liver. CYP1D1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410770
Aligned: 11 rows
Threshold Bit Score: 851.31
Created: 18-Jul-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
heme bindingputative
Feature 1:heme binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                            #              ##        #   #      #       
NP_001233600  69 YGDVFLLKLGmvPVLVVNgMEMVKQVLLKDGEHFAGRPNMHTFSflaEGKSLSFSVNygESWKLHKKIASKALRTLsnae 148 Rhesus monkey
AAI60554      58 YGDVFQIKLGlmPIVVVSgLETVKRVLLKEGENFADRPNFYSFSlfsNGSSMTFSEKygESWKIHKKIMKNALRNLsnes 137 western clawed ...
OCU01110      61 YGDVFQIKLGlmPIVVVSgFETVKTVLLKEGEHFADRPNFYSFSlfsDGKSMTFSEKygESWKIHKKIMKNALRTLsnes 140 African clawed ...
XP_018417766 118 YGDVFLIKLGmmPVVVVSgSDTVRKVLGKQGEHFADRPKFYSFSllaNGQSMTFSEKysEAWKIHKKIMKNALRSFskee 197 Nanorana parkeri
XP_006006360  75 YGNVYQIKLGslTVVVLSgIDTIKQALVRQGESFAGRPDLFTFSligNGASMTFGEKygQCWTLHKKIAKNALRTFsqte 154 coelacanth
NP_001007311  70 YGDVFQVKMGslVVVVLSgYTTIKEALVRQGDAFAGRPDLYTFSavaNGTSMTFSEKygEAWVLHKKICKNALRTFsqte 149 zebrafish
XP_029468168  66 YGEVFLIKLGvvPVVVVSgLETMKQVLVKQGDDYAGRPKLYSFSllaDGNSLSFSVEfgEKWKLHKKIAKNALRTFskse 145 two-lined caeci...
AXE15622       5 YGDVFQIKLGmlPVVVVNgLDAIKQVLLRDGESFAARPDMHTFSffaDGESLSFSVKygESWKLQKQIASKALRSLtkse 84  Eremias argus
XP_007897557  75 YGDVLCIKLGmvPVVVVSgMETIKQALIKQGNSFAGRPDFYTFSligNGKTMTFSEKygESWKLHKKIAKNALRAFslte 154 elephant shark
XP_028658183  69 YGNVFQIHIGtkSVVVVSgYEMIKTVLVTQGKCFANRPDFYSLSligNGESFTFSLKygESWKLLRKILGNALRSFsqek 148 reedfish
XP_007528813  69 YGDVFLIRLGllPVVVANgIETVKQVLLRDGELFAGRPKMHTFSfvaEGKSFSFSPHfgESWKLQKKIASNALRAFskae 148 western Europea...
Feature 1                                                                                        
NP_001233600 149 aksstcsclLEEHVTEEVSELVTVFVELssk--nggFDPRNAITCAVANVVCALCFGKRYdhsDEEFLKIVKTNDDLLKA 226 Rhesus monkey
AAI60554     138 tnssncscrLEEYVCAEASDLVQELTDLsae--kvaFDPSSLIVITVANVVCALSFGKRYdhhDKEFLTLIDFNNDLRKA 215 western clawed ...
OCU01110     141 tnlsncscrLEEYVCAEASDLVQELIDMsae--evaFDPSSLIVITVANVVCALSFGKRYdhqDKEFLTLIDLNNDLRKA 218 African clawed ...
XP_018417766 198 asssncscrLEEYISAEASELVNSMTQLskk--qgsFNPLPLVTITVANVVCALCFGKRYnhhDKEFLQIIELNDDLQRL 275 Nanorana parkeri
XP_006006360 155 aqnstcsclLEEHICSETTELVKLLVELskk--eeaFDPIDGLTSSVANVICALCFGRRYdhsDKEFLTLVQINHEVMRA 232 coelacanth
NP_001007311 150 pkdsnasclLEERICVEAIDMVETLKAQgeefgdsgIDPVQLLVTSVANVVCTLCFGKRYshnDKEFLTIVHINNEVLRL 229 zebrafish
XP_029468168 146 aksstcsciLEEQVSAEASELVRILSECsae--kgsIDPSSIITCAVGNVICALCFGKRYehsNKEFLSVVEINEELRKV 223 two-lined caeci...
AXE15622      85 atsstcsclLEEHVCAEALELVKTFVERskq--agsFDPVASTTCAVANVVCALCFNKRYdhdDEEFLCMLKINDDFLKA 162 Eremias argus
XP_007897557 155 aqsstcsclLEEHVCAEATELVKVLLNKaek--egaFDPVEPITSTVANVICALCFGKRYehnDKEFLNIVHTNHEVMRT 232 elephant shark
XP_028658183 149 aknstfsclLEEHASAEAVELAKDFDNYskd--nsyFNGRGLISCAVANVVCAICFGKRYehdDKDFHSLIEINNELQTA 226 reedfish
XP_007528813 149 akastcsclLEEHVTEEVSELVHLLGRLtte--kgsFDPRSAITCAVANVVCALCFGKRYdhsDQEFLKIVRTNDDLLKA 226 western Europea...
Feature 1                                                                                        
NP_001233600 227 SSAAnpadfipclrylPLQIINAPREFYRALNGFIALHVQDHlatydkdhIRDITDALINVChnkyaaaktdtLNDSEII 306 Rhesus monkey
AAI60554     216 AGGGlladfipilrfiPSSSVKALKKFVQSFHSFIAKCVKDHfatfeennIRDITDALIQLCkerksedknqlLSDDQII 295 western clawed ...
OCU01110     219 FGGGlladfipilrfiPSPSLKALKKFLQSFQSFIAQCVKDHfasfeentIRDITDALIQLCkerkskdksqqLSDEQII 298 African clawed ...
XP_018417766 276 SGAGlladfipvfkylPSSALNELKKFIGALNDFIAKSVQDHyeshdennIRDITDALIQLCsnrnnedkhhkLTDEQII 355 Nanorana parkeri
XP_006006360 233 FGSGnaadffpifrylPSPTLRHLIQFIKRMNNFVARNIEEHyntydkncIRDITDALIALCegrtiehesmvLSNEQVV 312 coelacanth
NP_001007311 230 FAAGnladffpifrylPSPSLRKMVEFINRMNNFMERNIMEHlvnfdtncIRDITDALIAMCedrqedkesavLSNSQIV 309 zebrafish
XP_029468168 224 SGACssvdflpllrflPFPAVKALRMFYSHLNNFITKSVQKHyatydknnVRDITDALIYLCderkledksqaLTDAEII 303 two-lined caeci...
AXE15622     163 SGAFnpadfipclrylPLPAAKAAREFYGKFNNFVAKHVEDHyatydkdhLRDITDALISVSnekrgdgkaaaLSHQKII 242 Eremias argus
XP_007897557 233 FASGnvadvfpffrylPSPSLKSMIKFVNRLNNFMIKSIQEHyttfdkncVRDITDTLIALCqnrkvgwnnavLTDEQIV 312 elephant shark
XP_028658183 227 SGSVslldfipilryfPSATLKAVHKFISGLNNYFERSIQEHydtynvnhIRDITDALINLCqtrdptgktacVTNKQII 306 reedfish
XP_007528813 227 SSIVnpadfipclhylPLQIINGPRQFYHALNQFIAQHVQKHittydknhIRDITDALINTChknaa-tktstLKDDEVI 305 western Europea...
Feature 1             #  ##  ##                                                     #    ##  ## #
NP_001233600 307 STVNDLFGAGFETVSTCLYWSFLYLIHYPEIQAKIQEEIDGNIGlkpp-rfeDRKILPYTEAFISEVFRHASFLPFTIPH 385 Rhesus monkey
AAI60554     296 STVNDIFGAGFDTITSALLWAIFYLLRYPEFQDKIHKEIEEKIGcnraprfnDRKDLHYTEAFINEVLRHSSFVPFGLPH 375 western clawed ...
OCU01110     299 ATVNDIFGAGFDTITSALLWAIFYLLRYPEFQDKIHKEIEEKIGcsraprfnDRKDLHYTEAFINEVLRHSSFVPFGLPH 378 African clawed ...
XP_018417766 356 ITVNDIFGAGFDTISSGLLWCMLYLLKYPEIQDKIHKEIDENIGisrsprfdDRKALHYTEAFINEVMRHASFVPFTIPH 435 Nanorana parkeri
XP_006006360 313 STVNDIFGAGFDTISTGLHWCLLYLIHYPEIQTNIQQEIDEKIGssrlprfdDKVSMPYTEAFINEVFRHTSYVPLTIPH 392 coelacanth
NP_001007311 310 HSVIDIFGAGFDTIITGLQWSLLYLIKFPNIQDKIVQEIDNQVGmdrlpqfkDRPNMPYTEAFINEVFRHASYMPFTIPH 389 zebrafish
XP_029468168 304 ATVHDIFGAGFDTVSSALQWALLYLLYYPECQRRIHEEIDEKIGdsrlprfdDRKELHYTEAFINEVFRHSSFVPFALPH 383 two-lined caeci...
AXE15622     243 VTVNDIFGGGFATLSVCLQWIFLYLINNPEIQMKIQEEIDAKIGerps-rfeDRKALHYTEAFIHEIFRHTSFLPFTIPH 321 Eremias argus
XP_007897557 313 STVTDIFGAGFDTIITGLQWCLLYLIQYPEFQTRIQQEIDEKVGqsrlprfeDRTLLPFTEAFINEVFRHTTYMPFTIPH 392 elephant shark
XP_028658183 307 NTVQDIFGAGIDTVPTALEWSILYLITYPEIQPRIQEEIDTYIGfsklprfeDRHSMHFTEAFINEVFRHSSFVPFTVPH 386 reedfish
XP_007528813 306 STVTDIFGAGFETVSTCIYWSFLYLICYPEIQVKIQEEIDGNIGlksp-rfeDRKHLPYTEAFISELFRHVSFLPFTIPH 384 western Europea...
Feature 1                              #                                     ###   # ###   #   # 
NP_001233600 386 CTTADTTLNGYFIPRKTCTFINMYQVNhDETIWdNPSLFRPDRFLneNRELNKSLVEKvLIFGMGIRKCLGEDVARNEIF 465 Rhesus monkey
AAI60554     376 CTTMDTKLNGYFLPKGTCVFTNLYQVNhDNTVWkDADMFMPERFLdqNGQIIKSLTEKvLVFGMGVRKCLGEDVARNEMF 455 western clawed ...
OCU01110     379 CTTVDTKLNGYFIPKGTCVFTNLYQVNhDNTVWkDADMFMPERFLdeNGQIIKSLTEKvLIFGMGVRKCVGEDVARNEIF 458 African clawed ...
XP_018417766 436 CTTMDTTLNDYFLPKNTSIFVNMYQVNhDPTVWkDADLFIPERFLdeAGHIDKSRVEKvLIFGMGVRKCVGEEVARNEMF 515 Nanorana parkeri
XP_006006360 393 CTTKNTIFNGYFIPKDTCVFINQYQVNhDEALWkDPHLFSPERFLdaNGQINKDLTEKvMIFGMGKRRCLGDNFARIEIF 472 coelacanth
NP_001007311 390 CTTENITLNGYFIPKDTCVFINQYQVNhDIEIWdDPESFRPERFLtlSGHLNKSLTEKvMIFGMGIRRCLGDNIARLEMF 469 zebrafish
XP_029468168 384 CTTRDTSLYEYFIPKNTCVFVNIYQVNhDQTLWkNPDMFTPERFLdaNKQLDKSMVEKvVLFGLGVRKCLGEDVARNELF 463 two-lined caeci...
AXE15622     322 CTTKDATLNGYHIPAKTCIFINMYQVNhDESLWaDPYLFKPHRFLneNGELNKSLAEKvLIFGMGIRKCLGEEVARNEVF 401 Eremias argus
XP_007897557 393 CTTASTTLNGYFIPKDTCVFINQYQVNhDETLWqDAGSFIPQRFLdeRGGLNKDVTEKvMMFGMGMRRCLGENIARLEMF 472 elephant shark
XP_028658183 387 CTTADTFLNGYLIPKDTCIFVNMYQVNhDRDLWkNPELFMPERFLdeLGQLNKEAVEKlLLFGMGVRKCMGEQIARNKIF 466 reedfish
XP_007528813 385 CTTADTTLNGYFIPKKTCIFINMYQVNhDETIWdNPSVFRPERFLneNRELNKNLVEKvLTFGMGIRKCLGEEVARNEIF 464 western Europea...
Feature 1                                             
NP_001233600 466 IFITAVLQQLKlkkcPRAKLDLTPTYGLAMRPKPYQL 502 Rhesus monkey
AAI60554     456 VIMTIMMQRLKlvksTKHELDPIPVYGLTLKPKPYYL 492 western clawed frog
OCU01110     459 VIMATMMQRLKlvksTKHELDPIPVYGLTFKPKAYYL 495 African clawed frog
XP_018417766 516 IILTSLLQQLQlmkePEQMVDLTSIFGLTMKPKPFNL 552 Nanorana parkeri
XP_006006360 473 IFLTTLLHQLNienpSGQILDLSPNYGLTMKPKHYKI 509 coelacanth
NP_001007311 470 VFLTTLLHRLHienvPGQELDLSSTFGLTMKPRPYRI 506 zebrafish
XP_029468168 464 LLLTAILQQLRverhPGDKLDLTPVYGIVMKPQAYRL 500 two-lined caecilian
AXE15622     402 VILTTILQQLRlekpPEDHLDLNPIYGLSMAPKPYRI 438 Eremias argus
XP_007897557 473 IFLTSLLHQLKienlPDQKLDLTPNYGLTMKPKSYKI 509 elephant shark
XP_028658183 467 VFLTTILQQVTlqkrLDDKICLTPHYGLAMKPAPFCF 503 reedfish
XP_007528813 465 IFITTILQQLTlkkcPGAQLDLTPKFGLAMKPKPYQL 501 western European hedgehog

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