1PKF,1Q5D


Conserved Protein Domain Family
P450_epoK-like

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cd20630: P450_epoK-like 
Click on image for an interactive view with Cn3D
cytochrome P450epok and similar cytochrome P450s
Sorangium cellulosum cytochrome P450epoK is a heme-containing monooxygenase which participates in epothilone biosynthesis where it catalyzes the epoxidation of epothilones C and D into epothilones A and B, respectively. This subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410723
Aligned: 7 rows
Threshold Bit Score: 484.236
Created: 25-Mar-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heme bindingchemical
Conserved site includes 21 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                             #                                    ##      #   #      
1PKF_A     39 TPIFYWDe-gRSWVLTrYHDVSAVFRDERfa-vSREEWESSAeyssaipe---lsdmkkygLFGLPPEDHARVRKLVNPS 113 Sorangium cellulosum
1Q5D_A     39 TPIFYWDe-gRSWVLTrYHDVSAVFRDERfa-vSREEWESSAeyssaipe---lsdmkkygLFGLPPEDHARVRKLVNPS 113 Sorangium cellulosum
EEB78101   42 GPLVWYEp-wQAWIMTqMEDIMGCWKTEPls-sDFYDWEFAPqrppedews-nferamighSLLADQSHHRVVRRVTAPA 118 marine gamma prote...
EDM74607   30 APVFDWSa-rGALVVSgMAELRTYFGEPRls-aDAREWELYPgdalfeqpryaawrrikraGVELAPADHARVRKLASRA 107 Plesiocystis pacif...
EDM75162   40 NRLCFWPg-pDFYVVSrMADAKAVLKDPRlt-pDPRAAGLPApeammpes---lrgpiegsFQRLGAEDHARVRRAVAPA 114 Plesiocystis pacif...
ACY14677   41 APAYYWPr-hQAWMMTrYDDVDALLRDPRfs-tDRRKWRYAHtlphasspe--laalfendLFTMHADDHRRVRKLVAPA 116 Haliangium ochrace...
EAU68495   37 QPALPYWeegRGWLLCrYEDAIAVLRDNKrftaNRSVWEFDAelglthqip-elaelsqygLFALADADHARVRKLVSPA 115 Stigmatella aurant...
Feature 1     #                                                                               
1PKF_A    114 FtsraidllRAEIQRTVDQLLDARSgqeef--dvvrdYAEGIPMRAISALLKVPae-cdEKFRRFGSATARALGvglvpr 190 Sorangium cellulosum
1Q5D_A    114 FtsraidllRAEIQRTVDQLLDARSgqeef--dvvrdYAEGIPMRAISALLKVPae-cdEKFRRFGSATARALGvglvpr 190 Sorangium cellulosum
EEB78101  119 FsrnvvdniQAKIEPEIKKLFDELGepesf--dyieaIANHIPFISITRMVGIPekywpEIKKVIVTFTETWNPtisde- 195 marine gamma prote...
EDM74607  108 LtpsgvrqmEATVQAAVDQAIAELLerdeev-vniceFAERIPLEVMCRLLGVPde-frGQFRRFAQAMIRSLQpfgdie 185 Plesiocystis pacif...
EDM75162  115 FapaaiaklRPAIQAIIDEAFEQHThegvl---dgraFAEHIPVRAIAAMMDVPmd-ehEAFFEFANNLSMLHDpamtpe 190 Plesiocystis pacif...
ACY14677  117 FsprsiarlEDEVRALVNSLLDDAKidqretfdvsqeLAEPLPIRVISTMLDIPae-kdEDFRVWGTSVIRLALpylpre 195 Haliangium ochrace...
EAU68495  116 LtpraierlRPEIQAIVDEILDGVEakgtv--nvvaeIADLIPARVIGSMLKIPkg-reVQFQRFTDAMIKNFVpglvca 192 Stigmatella aurant...
Feature 1                                                                  #  ##  ##          
1PKF_A    191 vdeetktlVASVTEGLALLHGVLDERRRNplendvltml-lqaeadgsrLSTKELVALVGAIIAAGTDTTIYLIAFAVLN 269 Sorangium cellulosum
1Q5D_A    191 vdeetktlVASVTEGLALLHGVLDERRRNplendvltml-lqaeadgsrLSTKELVALVGAIIAAGTDTTIYLIAFAVLN 269 Sorangium cellulosum
EEB78101  196 ---qreaaRQDSNKAIDIIKEVITERRQApvqddflstl-lrieeenegFEEGDIITMILALIGAGADTTLVAQQWTVYS 271 marine gamma prote...
EDM74607  186 ---vlngiADAVAEGVAMLEQMIGEVRSAsvrpdnllgawveanedderLSDDEMMALVAVLIIAGTDTTVHGTCYAIHG 262 Plesiocystis pacif...
EDM75162  191 ---rfatvAPVVVAGLARIEALVAARREQlgddllstl--lraeaqgdgLSNNELLGLVAMLINGGILTTTHFFTFVFKD 265 Plesiocystis pacif...
ACY14677  196 ---vlmeaAEKATAGVSMVRAIIAERRQNpgedilskl--isaqeegerLSEDELMSLVAGLLVAGSETTVHLITFATYQ 270 Haliangium ochrace...
EAU68495  193 --reveamRPDIAGGLELIRETVEDRRRHpqeedilttl-irteergdsLNAQELLSLVAALIVGGFETTVHLISFTVYN 269 Stigmatella aurant...
Feature 1                                        # #                                          
1PKF_A    270 LLRSpeALELVKaepglMRNALDEVLRFENILrIGTVRFARQdleycgasiKKGEMVFLLIPSALrdgtvfsrPDVFDVR 349 Sorangium cellulosum
1Q5D_A    270 LLRSpeALELVKaepglMRNALDEVLRFDNILrIGTVRFARQdleycgasiKKGEMVFLLIPSALrdgtvfsrPDVFDVR 349 Sorangium cellulosum
EEB78101  272 LLKHkdQIDKALatpdtFSNAFSEISRWGVASkMGFARYAPDnmqfmgqqlRKGVMVLMMPHLKDynlkyydnPEIFDVE 351 marine gamma prote...
EDM74607  263 LLSHpeALRELRaepelLRGAIEETLRWDGFGkLALMRYATEsfelcgtpvRKGQMVIGLGGAANrdpkvfsePDRFDIR 342 Plesiocystis pacif...
EDM75162  266 LLCVpeREAAIRaqrelIPTALEELLRHDSFGkSGTLRYLTEdaevagvelPRGSRVMVFFPAVYldeeafedAARFDPA 345 Plesiocystis pacif...
ACY14677  271 FLTHedSRRRLQddpslLGNALEESLRHDNFGkSGVTRYALEdvelhgktiEKGDMVILNLASALldervwpdAERFDVT 350 Haliangium ochrace...
EAU68495  270 LLQRpeVLAQVKaepelSRNVIEEVLRFDNFGkMGLARYALEdvelggvtiKKGQLVLVMLNSALrdegtfssADVFDVR 349 Stigmatella aurant...
Feature 1            ###   # ###   #                                            
1PKF_A    350 RDtsasLAYGRGpHVCPGVSLARLEAEIAVGTIFRRfpe-mkLKETPVFgy-hpAFRNIESLNVIL 413 Sorangium cellulosum
1Q5D_A    350 RDtsasLAYGRGpHVCPGVSLARLEAEIAVGTIFRRfpe-mkLKETPVFgy-hpAFRNIESLNVIL 413 Sorangium cellulosum
EEB78101  352 REfnpdVMFGYGpRFCIGAALAKRQLYLTVSELHRRfpn-ieLAEEPERdp--tDHNAIVFKRLLL 414 marine gamma proteobacterium HTC...
EDM74607  343 RDpqanITFGHGrRYCLGANLARTEMMLAVRSLLIErfpeaeLAGPVVIdhrnpILRAMTQLPLRL 408 Plesiocystis pacifica SIR-1
EDM75162  346 RKpkdnLGYGYGrHFCTGAALARLESEVFVHTALDRfag-feLAEPVAFgp-spVVRDIVTLRVRT 409 Plesiocystis pacifica SIR-1
ACY14677  351 RDpvsnITFGRGaHFCLGAHLARLEGRVAMQTLLERfpe-mqLAGPPSFdyahpFIRRIDKLEVRL 415 Haliangium ochraceum DSM 14365
EAU68495  350 RHtnasIAFGHGvHYCIGANLARLEVQLAVSTLVRRfpr-mqLLGPPSFgp-hpVLRKMESLEVQL 413 Stigmatella aurantiaca DW4/3-1

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