1GUX,4ELJ,4ELL,3POM,2R7G,1N4M,1GH6


Conserved Protein Domain Family
CYCLIN_RB

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cd20599: CYCLIN_RB 
Click on image for an interactive view with Cn3D
cyclin box found in retinoblastoma-associated protein (RB) and similar proteins
RB, also called p105-Rb, pRb, or pp110, is a key regulator of entry into cell division and also acts as a tumor suppressor. It promotes G0-G1 transition when phosphorylated by CDK3/cyclin-C. It also acts as a transcription repressor of E2F1 target genes. RB is directly involved in heterochromatin formation by maintaining overall chromatin structure, especially that of constitutive heterochromatin by stabilizing histone methylation. It recruits and targets histone methyltransferases SUV39H1, KMT5B and KMT5C, leading to epigenetic transcriptional repression. It controls histone H4 'Lys-20' trimethylation. RB contains one cyclin box. The cyclin box is a protein binding domain.
Statistics
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PSSM-Id: 410302
Aligned: 22 rows
Threshold Bit Score: 201.75
Created: 15-Apr-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
LxCxE peptideE2F
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:LxCxE peptide binding site [polypeptide binding site]
Evidence:
  • Comment:The HPV E7 peptide contains the LxCxE motif, shared by other Rb-binding viral and cellular proteins.
  • Structure:1GUX; Homo sapiens RB binds E7 Lxcxe motif, contacts 4A
    View structure with Cn3D
  • Citation:PMID 9495340
  • Structure:2R7G; Homo sapiens RB in complex with early E1A 32 kDa protein, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                               #   ##   
1GUX_B        10 TSLSLFYKKVYRLAYLRLNTLCERLls-------ehPELEHIIWTLFQHTLQNEYELMrDRHLDQIMMCSMYGICKVKn- 81   human
XP_013391760 149 HSLNLFFNKVSRLAYHRLQDLCTLLai--------pKDMQLKIWTCLEHCITRKPDLLrDRHLDQVMLCSVYAIHKVIst 220  Lingula anatina
XP_002595214 178 QSLQLFYNKVCKLAYMRLQSLCKLLcv--------sAEMEHRIWTALEFCLLHRPELLkNRHLDQVIMCSVYAICKVSg- 248  Florida lancelet
PVD18624     566 TSLTAFFNKVYRLAYHRLQRLCSMLql--------gKDLLQKIWTCFENCITYRLDLLkNRHIDQILMCSLYGVCKVAd- 636  Pomacea canali...
XP_006811897 234 QTLNLFYNKVLRLAYTRLQALCKELvv--------tLDLERFIWTTVEYCVTHRPELLkDRHLDQVMLCCIYGVCKAAd- 304  Saccoglossus k...
ELT97791     170 NSLSLFFVKACRLAHHRMSILCGHLdl--------nSDLQKQIWSCIETCICHRTKILqDRHLDQVIMCALYGVCKIRe- 240  Capitella teleta
RMX42094     533 QSLNLFLRRVNQLSYHRLTTLCDKLevsdtltclkfSCQVSHMWTCLEHSLRLHWQLMvDRHLDQMLLCAVYAISKVVg- 611  Pocillopora da...
P06400       645 TSLSLFYKKVYRLAYLRLNTLCERLls-------ehPELEHIIWTLFQHTLQNEYELMrDRHLDQIMMCSMYGICKVKn- 716  human
PIK46533     508 VFLTKFLMKAQQLGFKRLERLSQPLkl--------sGDITHRIWTCVDHCIRQRPDLLeGRHLDQIIMCCIYAICRVGsa 579  Japanese sea c...
XP_015916676 557 HGINLFLTKVCRLGYQRLEKMCNLLdi--------dRDTLTNIWTCVEHVLYEKTHLLkDRHLDQIIMCCIFGVCKVAe- 627  common house s...
Feature 1            ##                               #  ##   #          
1GUX_B        82 -iDLKFKIIVTAYKDLPHavQETFKRVLIKeeEYDSIIVFYNSVFMQRLKTNILQY 136  human
XP_013391760 221 dtELKFKTIVHMYKSMPHatQEVFKNALISgnEYDSIIGFYNRVFMQATKNVILQF 276  Lingula anatina
XP_002595214 249 -cDTKFKSIVAAYKNLPTasQTVYKEAWISgeEYDSIIGFYNRVYMQTLKNYILRF 303  Florida lancelet
PVD18624     637 -kEVRFKTIVQEYKNLPHarEEVFRRVSMDggRFDSIIIFYNQIFMFSMKSIILQF 691  Pomacea canaliculata
XP_006811897 305 -sELRFKDIVAVYRRLYQysQHVYKSVLINgeEYDSIIGFYNRIFMPSLKMYILQF 359  Saccoglossus kowalevskii
ELT97791     241 -kDITFRSIVKKYLLLPHssSQVYRHVAMPdeAASSIISFYNQIFMQQLKDHLVAI 295  Capitella teleta
RMX42094     612 -kEIQFKQIVTVYKGLPFasAQVYKGTSGR--EQESIIGFYNKVYMVAMKSTILQF 664  Pocillopora damicornis
P06400       717 -iDLKFKIIVTAYKDLPHavQETFKRVLIKeeEYDSIIVFYNSVFMQRLKTNILQY 771  human
PIK46533     580 qnQRRLKEIANLYEKMPHadSSTYKQVRLGagETGHIIKFYNDVFVPAMKTFILSQ 635  Japanese sea cucumber
XP_015916676 628 -rPVLFKTIIACYGQLSNfsSTVYKQVLSNg-KKEFIVHFLNREFSQEMQTYINSL 681  common house spider

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