Conserved Protein Domain Family
CYCLIN_AtCycD-like_rpt1

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cd20543: CYCLIN_AtCycD-like_rpt1 
first cyclin box found in plant cyclin-delta family
This subfamily is composed of plant delta family cyclins, including a group of G1/S-specific D-type cyclins from Arabidopsis thaliana which may activate the cell cycle in the root apical meristem (RAM) and promote embryonic root (radicle) protrusion. Members of this family contain two cyclin boxes. This model corresponds to the first one. The cyclin box is a protein binding domain.
Statistics
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PSSM-Id: 410246
Aligned: 14 rows
Threshold Bit Score: 120.885
Created: 12-Apr-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P42751    81 AREDSVAWILKVQAYynFQPLTAYLAVNYMDRFLYarrlp--etsgWPMQLLAVACLSLAAKMEEilvPSLFDFQVAGvk 158 thale cress
Q8LGA1    77 GRRDALNWIWKACEVhqFGPLCFCLAMNYLDRFLSvhdlp--sgkgWILQLLAVACLSLAAKIEEtevPMLIDLQVGDpq 154 thale cress
Q0WQN9    68 VRIQALGWIWKACEElqFGPLCICLAMNYLDRFLSvhdlp--sgkaWTVQLLAVACLSLAAKIEEtnvPELMQLQVGApm 145 thale cress
ADE76356  88 VRQDGLSWILKVHAYynFGPLTAYLAINYLDRFLSsyqmp--qgkaWMLQLLSVSCLSLAAKMEEthvPLLLDLQIEDak 165 Sitka spruce
CAD32542  82 ARLAAIEWILKVHSFynYSPLTVALAVNYMDRFLSryyfp--egkeWMLQLLSVACISLAAKMEEsdvPILLDFQVEQee 159 Physcomitrella patens
EFJ17897  90 ARSNAVDWMIKVRGVygFSPATVALSVSYLDRYLAkelrh-kvwkaWMIELLSIACLSLAAKMEEtfvPLLQDLQIEGle 168 Selaginella moellen...
P42752    96 VRNQALDWILKVCAHyhFGHLCICLSMNYLDRFLTsyelp--kdkdWAAQLLAVSCLSLASKMEEtdvPHIVDLQVEDpk 173 thale cress
Q9ZR04    57 NRNQAISSITQYSRKf-DDPSLTYLAVNYLDRFLSsedmp--qskpWILKLISLSCVSLSAKMRKp-dMSVSDLPVEGe- 131 thale cress
P42753    86 DRKEAVGWILRVNAHygFSTLAAVLAITYLDKFICsyslq--rdkpWMLQLVSVACLSLAAKVEEtqvPLLLDFQVEEtk 163 thale cress
Q2V3B2    71 DRLIAIDWILTTRTRfgFQHQTAYIAISYFDLFLHkrfiglqkdetWAMRLLSVACLSLAAKMEErivPGLSQYPQDHdf 150 thale cress
P42751   159 ylFEAKTIKRMELLVLSVLDW 179 thale cress
Q8LGA1   155 fvFEAKSVQRMELLVLNKLKW 175 thale cress
Q0WQN9   146 fvFEAKSVQRMELLVLNVLRW 166 thale cress
ADE76356 166 yvFEARTIERMELLILTTLKW 186 Sitka spruce
CAD32542 160 hiFEAHTIQRMELLVLSTLEW 180 Physcomitrella patens
EFJ17897 169 hlFESVTIQRMEVSVMKLLEW 189 Selaginella moellendorffii
P42752   174 fvFEAKTIKRMELLVVTTLNW 194 thale cress
Q9ZR04   132 -fFDAQMIERMENVILGALKW 151 thale cress
P42753   164 yvFEAKTIQRMELLILSTLEW 184 thale cress
Q2V3B2   151 -vFKPDVIRKTELLILSTLDW 170 thale cress
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