3GCD,3EEB,3FZY


Conserved Protein Domain Family
C80_RtxA-like

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cd20501: C80_RtxA-like 
peptidase C80 cysteine binding domain of RTX toxin RtxA and related proteins
This peptidase C80 family includes the autoproteolytic cysteine protease domain (CPD) of Vibrio cholerae multifunctional autoprocessing repeats-in-toxin (MARTX) toxin that causes disassembly of the actin cytoskeleton and enhances V. cholerae colonization of the small intestine, possibly by facilitating evasion of phagocytic cells. The central region of this toxin is composed of several domains, including the actin cross-linking domain (ACD) that introduces lysine-glutamate cross-links between actin protomers, the Rho-inactivating domain (RID) that disables small Rho GTPases, and an autoprocessing cysteine protease domain (CPD). Within the cell, the CPD is activated by the binding of inositol hexakisphosphate to release individual effector domains of the toxin into the cytosol. The CPD contains the characteristic Cys/His residues in the active site.
Statistics
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PSSM-Id: 410974
Aligned: 30 rows
Threshold Bit Score: 234.064
Created: 12-Jul-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic siteallostericpeptide
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: catalytic site [active site], 2 residue positions
Conserved feature residue pattern:H CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Site-directed mutagenesis has been used to identify functional residues (His, Cys) in cholera RTX toxin

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
3GCD_A         14 WGPITVTpttdg---getrfDGQIIVQMENDpVVAKAAANLAGKHaesSVVVQLDsdGNYRVVYgdps--kldgKLRWQL 88   Vibrio cholerae
3EEB_A         14 WGPITVTpttdg---getrfDGQIIVQMENDpVVAKAAANLAGKHaesSVVVQLDsdGNYRVVYgdps--kldgKLRWQL 88   Vibrio cholerae
REF27903      922 WEKPVVEayhee---rksrfDGQLIIQLENDpIVMEAAAKLAGKHp-dSVLVQLDaqGQYRVVHgdltiledkeKIRWQL 997  Xenorhabdus c...
WP_119797735   29 WKKPTVNtlnrg---fhsrfDSQIILQLEDDpVVMEAAARLVSKHpdrSVLFQLDvqGNYHLVYgnpr--mlagNLRWQV 103  Candidatus Fu...
EFL91320       54 WKTQEVSlmgsg---ensrfASQLVLQLEDNpAVRKAAAKLAGKYpgrSVLVQLDaeGHYRVVYgdps--ilrgYLRWQV 128  Candidatus Re...
EGY28953       94 WEKATFFhlspr---tttrfDSQLILQLEDDsEVRDAAAKLAAKHpdkSVLVQLDnsGNYRVIYgslr--rlkgNLRWQV 168  Candidatus Re...
ACQ68836       40 WKIQPVItrpals-ggltryAGQLIIQLQDDdTVLKAAVNLTEKHp-gSVLVQLDkrNNYRVLHgspn--tlqgKLRWQL 115  Candidatus Ha...
EFL92496       50 SNKLAVSganys---antrfDSQLILQLEDDlAVVIAAEKLTSKHpdrSVQFKFDseGRLHLVYgnv----lsgQLRWQV 122  Candidatus Re...
WP_119797491  271 WRSTFIIpekqdgeipyngfDGQVIVQLEDDpTVMEAASDLAAKRpgaSVLFQLDaaGALHLVYgdps--llrgNLRWYL 348  Candidatus Fu...
ACQ68809      567 MIKNTETr-----------fAGQIIVELEEDrVVSEAAKRLAGKHaekSLIIQLKkdGEYEVVKgnpy--llrgDLRWQV 633  Candidatus Ha...
Feature 1           #                                                       #                     
3GCD_A         89 VGHGRDHSe----tNNTRLsgysADELAVKLAKFqqsfnqae---ninnkpdHISIVGCslvsd-dkqkgFGHQFINAMD 160  Vibrio cholerae
3EEB_A         89 VGHGRDHSe----tNNTRLsgysADELAVKLAKFqqsfnqae---ninnkpdHISIVGCslvsd-dkqkgFGHQFINAMD 160  Vibrio cholerae
REF27903      998 VGHSRDGEtk---lSHQTLakrtPEALASQLSQFctdsgv-------ktppeHISMVSCslage-gqqesYALKFAQSLD 1066 Xenorhabdus c...
WP_119797735  104 VGHGHSVEge---lNHQTLagynPAELAESIRQFssklktvy---gidsdpnYISLVGCsltdyhlqtggYARQFALSLD 177  Candidatus Fu...
EFL91320      129 VGHGRKDDrt---kHDQTLggsdALELASKIARLsqqlnddy---sinsqpgYISLVGCslaer-dvttnYAHQLALSLD 201  Candidatus Re...
EGY28953      169 VGHGRGGInh---iNHQTLagydPAGLAEKISQLstqlhrdy---gihaapnYLSLVGCslvdetgqtggYAKKFGLLLA 242  Candidatus Re...
ACQ68836      116 VGHGSRPRalsrsrSIGSFsgmkPASLARLLKDFnqkfnqih---gikmipnRISLVGCqlmsh--krknFATQFAREIK 190  Candidatus Ha...
EFL92496      123 VGHGSGGEne---iNHQTLggysPTKLAEKIKQLstilysty---qvnstphYVSLVGCsltdydlqtggYAYQFGIALD 196  Candidatus Re...
WP_119797491  349 VGHGRGDNe----sDHNTLagytASELAKKVADLsnrldtdysdsgirsapsYVSLVGCaltdn--nnggYTRQFALSLK 422  Candidatus Fu...
ACQ68809      634 VGHSREGAne---gYPGTFggasAEQLSNQLIALhaqlkkqf---rinprpkYISLVGCslaaagvedksYARHFGKALK 707  Candidatus Ha...
Feature 1                                                          
3GCD_A        161 ANgl-rVDVSVRSsELAVDeaGRKHTkd--anGDWVQKaenNKVSLSWD 206  Vibrio cholerae
3EEB_A        161 ANgl-rVDVSVRSsELAVDeaGRKHTkd--anGDWVQKaenNKVSLSWD 206  Vibrio cholerae
REF27903     1067 QRir-pYSVKAYAtPVTVSpdGRKQPte---dGNKATFv-fNQKHEVWT 1110 Xenorhabdus cabanillasii
WP_119797735  178 AIgl-rADVAARRtDVSINrlGQKATlg--ddGVMYHKmsdDKLVLTWN 223  Candidatus Fukatsuia symbiotica
EFL91320      202 QQgi-rTDIAARRtDVMVSqsGRKFTqs--seGDWQHKiseDKLLLRWN 247  Candidatus Regiella insecticola LSR1
EGY28953      243 KQgi-yADIGARKtRLLVNehGQKRTag--raGGWQDTigdDKLVLSWN 288  Candidatus Regiella insecticola 5.15
ACQ68836      191 RQgi-qAEISARTqTLYVSgvGRKFTdntrsqGATQTAg--DTILLGWN 236  Candidatus Hamiltonella defensa 5AT (Acyrtho...
EFL92496      197 KQgi-rADIAARRtQMAVNelGHKITls--ddGFLYHKiseDKLVLTWN 242  Candidatus Regiella insecticola LSR1
WP_119797491  423 EQgi-tADVSGRRtPIIVDrdGRKFTrs--adNRWINGlddNKLVLTWD 468  Candidatus Fukatsuia symbiotica
ACQ68809      708 HQagwqIDIGARRlPVTVNaeGRKLSv----vNEAASEempDKVVLSWT 752  Candidatus Hamiltonella defensa 5AT (Acyrtho...

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