3H8Z


Conserved Protein Domain Family
Tudor_Agenet_FXR2_rpt2

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cd20476: Tudor_Agenet_FXR2_rpt2 
second Tudor-like Agenet domain found in fragile X mental retardation syndrome-related protein 2 (FXR2) and similar proteins
FXR2 is an RNA-binding protein that associates with polyribosomes, predominantly with 60S large ribosomal subunits. It may have a role in the development of fragile X mental retardation syndrome. FXR2 contains two copies of the Tudor-like Agenet domain. The model corresponds to the second one. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.
Statistics
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PSSM-Id: 410547
Aligned: 4 rows
Threshold Bit Score: 148.288
Created: 30-May-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Tudor domain superfamily members with bound methylated/dimethylated peptides
  • Comment:In general, the Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  #        # #               #    # #                       
3H8Z_A        61 ITEGDEVEVYSRANEQEPCGWWLARVRXxKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF 128 human
P51116        69 ITEGDEVEVYSRANEQEPCGWWLARVRMmKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATKGSF 136 human
NP_956505     59 ICEGDEVEVYSRANEQEPCGWWLARVRMmKGEFYVIEYAACDATYNEIVTSERIRPVNPNSPSAQNSF 126 zebrafish
XP_014349797 194 ITEGDEVEVYSRANEHEPCGWWLARVRMmKGDFYVIEYAACDATYNEIVTLERLRPVNPNKVSTKNSF 261 coelacanth

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