5XFR,2EQJ


Conserved Protein Domain Family
Tudor_MTF2

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cd20450: Tudor_MTF2 
Tudor domain found in metal-response element-binding transcription factor 2 (MTF2) and similar proteins
MTF2, also called metal regulatory transcription factor 2, metal-response element DNA-binding protein M96, or Polycomb-like protein 2 (PCL2), complexes with the Polycomb repressive complex-2 (PRC2) in embryonic stem cells and regulates the transcriptional networks during embryonic stem cell self-renewal and differentiation. It recruits the PRC2 complex to the inactive X chromosome and target loci in embryonic stem cells. Moreover, MTF2 is required for PRC2-mediated Hox cluster repression. It activates the Cdkn2a gene and promotes cellular senescence, thus suppressing the catalytic activity of PRC2 locally. MTF2, like other PCL family proteins, consists of an N-terminal Tudor domain followed by two PHD domains, and a C-terminal MTF2 domain. PCL proteins specifically recognize tri-methylated H3K36 (H3K36me3) through their N-terminal Tudor domains.
Statistics
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PSSM-Id: 410521
Aligned: 9 rows
Threshold Bit Score: 105.113
Created: 11-Dec-2018
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide binding
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide binding site [polypeptide binding site]
Evidence:
  • Structure:5XFR; Homo sapiens MTF2 in complex with a peptide from Histone H3.1, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #   ###                 ### #              
5XFR_A         4 KFEEGQDVLARWSDGLFYLGTIKKINIlKQSCFIIFEDSSKSWVLWKDIQTGAT 57  human
2EQJ_A        13 KFEEGQDVLARWSDGLFYLGTIKKINIlKQSCFIIFEDSSKSWVLWKDIQTGAT 66  house mouse
NP_989839     45 KFEEGQDVLARWSDGLFYLGTIKKINKlKQNCFIIFEDSSKSWVLWKDIQTGAT 98  chicken
AAH92734      45 KFEEGQDVLARWSDGLFYLGTISKIDKhKHRCFVIFEDQSESWVLWKDIQTGDS 98  zebrafish
AAI11505      45 KFEEGQDVLARWSDGLFYLGTIKKINKlKQSCFILFEDSSKSWVLWKDIQTGAI 98  African clawed frog
Q9Y483        45 KFEEGQDVLARWSDGLFYLGTIKKINIlKQSCFIIFEDSSKSWVLWKDIQTGAT 98  human
ACT63869      29 RFEEGQDVLARWSDGLFYLGTISKIDKhKHRCFVIFEDQSKSWVLWKDIQTGDS 82  brown garden snail
XP_014347274  45 KFEEGQDVLARWSDGLFYLGTIKKINKlKQSCFVIFEDHSKSWVLWKDIQTGAT 98  coelacanth
XP_007885339  46 KFEEGQDVLARWSDGLFYLGTVKKVNKqKESCFVIFEDSSKSWVLWKDIQTGAS 99  elephant shark

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