Conserved Protein Domain Family
Tudor_TDRD15_rpt6

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cd20441: Tudor_TDRD15_rpt6 
sixth Tudor domain found in Tudor domain-containing protein 15 (TDRD15) and similar proteins
TDRD15 is an uncharacterized Tudor domain-containing protein that contains seven Tudor domains. This model corresponds to the sixth one. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.
Statistics
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PSSM-Id: 410512
Aligned: 6 rows
Threshold Bit Score: 176.854
Created: 11-Dec-2018
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Tudor-like family proteins with bound methylated/dimethylated peptides
  • Comment:In general, the Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                         #      #                #  # #  
B5MCY1       1306 NPANFHIQLAENESVIIRLADALNatarrl-rerksvKPLVGDLVVAEYSGDnAIYRAVIKKIlpgNSFEVEFIDYGNSA 1384 human
EMP26150     1347 SPSSFYIQLAEDENIIIQLAEELNegkinvdhenylnELVAGDLVLAEYVIDcFLYRAVIKTVssgKSYEVEFIDYGNTA 1426 Green sea turtle
XP_019727118 1225 SVSRFFLQLSEDEAAILKMVGEINsmsehs--lraavSVRFDELVLARYDEDaALYRAVVRAYegqSRFKVAFLDYGNSA 1302 tiger tail se...
NP_001182210 1233 SAGRFFIQMEDDEPKLLQMIEELNgtnfkdkrrnvetEIKVGDLVAAEYEEDlALYRAVVTNVlnsDLLAVEFIDYGNTA 1312 zebrafish
XP_006000043 1463 DPSRFFIQLEKDIKVILDLAIEMNeginkecggnpysKLMIGDLVAAEFTEDgALYRAAITEIcpeGTYKVEFIDYGNTE 1542 coelacanth
OCT81294     1230 SPSSFYIQLSKNEKTLVHLAEELNeqpmsf-qalsdtDCKKGMLVAAEYPEDlSFYRAKILDVrkdKSFDVEFIDYGNTA 1308 African clawe...
Feature 1                                      
B5MCY1       1385 IVNtsKIYELQREFLTvPQLGIHAFLSGV 1413 human
EMP26150     1427 VVSpsKIYKIQEKFLTlPRFSIHCFLSRV 1455 Green sea turtle
XP_019727118 1303 VVEkgEIYTLPQEYFSlPAFSIRCSLVDL 1331 tiger tail seahorse
NP_001182210 1313 TVDrkNVHMLTNTFLSqPRLSMPCTLAKP 1341 zebrafish
XP_006000043 1543 TVDylNVYRLQEKFLEkPRLSIPSQLSKV 1571 coelacanth
OCT81294     1309 NVS--SLFLLPDKFLSvPKLSISASLSGI 1335 African clawed frog

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