Conserved Protein Domain Family
Tudor_TDRD7_rpt3

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cd20429: Tudor_TDRD7_rpt3 
third Tudor domain found in Tudor domain-containing protein 7 (TDRD7) and similar proteins
TDRD7, also called PCTAIRE2-binding protein, or Tudor repeat associator with PCTAIRE-2 (Trap), is a component of specific cytoplasmic RNA granules involved in post-transcriptional regulation of specific genes: probably acts by binding to specific mRNAs and regulating their translation. It is required for lens transparency during lens development, by regulating translation of genes such as CRYBB3 and HSPB1 in the developing lens. It is also essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis. TDRD7 contains three Tudor domains. The model corresponds to the third one. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.
Statistics
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PSSM-Id: 410500
Aligned: 7 rows
Threshold Bit Score: 183.072
Created: 27-Oct-2006
Updated: 9-Sep-2024
Structure
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Aligned Rows:
 
putative
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Tudor-like family proteins with bound methylated/dimethylated peptides
  • Comment:In general, the Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                #    #                #  # #             
Q8NHU6        930 QPWQEIHKLEVLMEEMILYYSVSEerhiaVEKDQVYAAKVenKWHRVLLKGILTNgLVSVYELDYGKHELVNiRKVQPLV 1009 human
A6NAF9        911 QPWQDLYKLVVLMGEMVLFYNKQEvttvdIQKNNVYAAKIdnNWHRVLVKGLLTNgLVSVYELDYGKYELINyTQLQPLI 990  zebrafish
Q6NU04        911 QPWQELHKLELVMDEMRLHYSTTEekpiaLEKNKLYAAKIenNWYRVLVKGILTNgLVSVYELDHGRHELVScRKVQPLI 990  African clawe...
E7FDW8        917 QPWQDMYKLVVLMGEMILHYNKMEekalkVEKNQVCAAKVenNWYRVLVKGVLTNgLVSVFQLDYGKHELVSgTKLRPLT 996  zebrafish
E1C3S7        903 QPWKEIHNLEALMEEMILYYSMAEerpvnIGTNKLYAAKIenRWYRVIVKGILRKgFLSVYVLDYGKHEVISiDKVQPLL 982  chicken
XP_014345378  980 QPWQELHKLEVLMEEMILCYNTTEeqsltIEKNKIYAAKVdnKWYRVLVKGVLTNgLVSIYELDHGRHELISyRNVQPLI 1059 coelacanth
XP_007897201  982 QPWQELYKLEVLMEEMILYYNRTDwqsvpIEKNKIFAAQLdnKWYRVLVKGILTNgLVSVYQLDYGRHELVScRKVQTLV 1061 elephant shark
Feature 1                    
Q8NHU6       1010 DMFRKLPFQAV 1020 human
A6NAF9        991 EEFRQLPFQGI 1001 zebrafish
Q6NU04        991 EKFMHLPFQAI 1001 African clawed frog
E7FDW8        997 QEFCQLPFQAI 1007 zebrafish
E1C3S7        983 DKFRKLPFQAI 993  chicken
XP_014345378 1060 EKFRQLPFQAV 1070 coelacanth
XP_007897201 1062 QQFRQLPFQAV 1072 elephant shark

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