2FHD


Conserved Protein Domain Family
Tudor_SpCrb2-like_rpt2

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cd20396: Tudor_SpCrb2-like_rpt2 
second Tudor domain found in Schizosaccharomyces pombe Cut5-repeat binding protein 2 (Crb2) and similar proteins
Crb2, also called RAD9 protein homolog, or checkpoint mediator protein crb2, is a DNA repair protein essential for cell cycle arrest at the G1 and G2 stages following DNA damage by X-, and UV-irradiation, or inactivation of DNA ligase. Crb2 contains two Tudor domains. The model corresponds to the second one. The Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.
Statistics
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PSSM-Id: 410467
Aligned: 4 rows
Threshold Bit Score: 115
Created: 21-May-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
putative
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:putative peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Tudor domain superfamily members with bound methylated/dimethylated peptides
  • Comment:In general, the Tudor domain binds to proteins with dimethylated arginine or lysine residues, and may also bind methylated histone tails to facilitate protein-protein interactions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 # # #                               # # #                        
2FHD_A        65 KKGDVVQSTRlGKIKHTVVKTFRSTNEQLSLiaVDALNNDXVILAH-GEIEVTVPISTIYVAPVNIRRFQGRDL 137 fission yeast
P87074       419 KKGDVVQSTRlGKIKHTVVKTFRSTNEQLSLiaVDALNNDMVILAH-GEIEVTVPISTIYVAPVNIRRFQGRDL 491 Schizosaccharomyces p...
XP_013024773 443 KEGDIVRSTA-LRLNHTVLRAYHSTGENTSIppTDAFGNDMVSLRIgKQDEVAVPMSTIYLIPSQIRKFKDRDF 515 Schizosaccharomyces c...
XP_013018851 438 KKGDVVRSTA-LKLNHSVLRTYSSSTENISVtcTDIFGNDMVLLRVdKNGDVAVPMSTIYLIPSQIRKFKDRDF 510 Schizosaccharomyces o...

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