2RT9


Conserved Protein Domain Family
BRcat_RBR_FBXO43

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cd20365: BRcat_RBR_FBXO43 
Click on image for an interactive view with Cn3D
BRcat domain found in F-box only protein 43 (FBXO43)
FBXO43, also called FBX43 or endogenous meiotic inhibitor 2 (EMI2), plays a key role during the meiotic cell cycle. It is required to establish and maintain the arrest of oocytes at the second meiotic metaphase until fertilization. It probably acts by inhibiting the anaphase-promoting complex/cyclosome (APC/C) ubiquitin ligase. It may recognize and bind to some phosphorylated proteins and promotes their ubiquitination and degradation. FBXO43 contains an F-box domain, and the first half of the RBR domain that was previously known as RING-BetweenRING-RING domain or TRIAD [two RING fingers and a DRIL (double RING finger linked)] domain. Based on current understanding of the structural biology of RBR ligases, the nomenclature of RBR has been changed to RING1-BRcat (benign-catalytic)-Rcat (required-for-catalysis) recently. The RBR domain uses an auto-inhibitory mechanism to modulate ubiquitination activity, as well as a hybrid mechanism that combines aspects from both RING and HECT E3 ligase functions to facilitate the ubiquitination reaction. This model corresponds to the BRcat (benign-catalytic) domain that adopts the same fold as the Rcat domain while lacking the catalytic cysteine residue and ubiquitination activity.
Statistics
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PSSM-Id: 439026
Aligned: 9 rows
Threshold Bit Score: 80.6099
Created: 5-Oct-2015
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C H CClick to see conserved feature residue pattern help
Evidence:
  • Structure:2RT9; Mus musculus FBX43 binds two Zn2+ ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #  #              #    #    #  #    #    #   
2RT9_A         9 DEALKPCPRCQSPAKYQPhKKRGLCSRlACGFDFCVLCLCAYHGSEDCRRG 59  house mouse
XP_005499471 595 DEALKPCPRCQYPAKYQLvKKRGLCSReACGFEFCILCLHAFHGSKECTSL 645 rock pigeon
Q8AXF4       577 DEALKPCPRCQYPAKYQAlKKRGTCSRkDCGFDFCSLCLCTFHGSKECGTG 627 African clawed frog
XP_007894957 584 NEALKPCPRCQSPAKYNPmKKQGLCSSdDCAFDFCTQCFCAFHGSKECSSR 634 elephant shark
Q4G163       634 DEALKPCPRCQSPAKYQPyKKRGLCSRtACGFDFCVLCLCAYHGSEECSRG 684 human
XP_005995443 600 DEALKSCPKCRGPAKYQPiKNQGICSReGCAFDFCSLCLCAFHGSKGCGSG 650 coelacanth
NP_956725    480 DEFLKACPRCQHPAVCHPvRAEGVCSWsDCSFRFCTACLCALHGSRDCTPQ 530 zebrafish
Q8CDI2       566 DEALKPCPRCQSPAKYQPhKKRGLCSRlACGFDFCVLCLCAYHGSEDCRRG 616 house mouse
Q66H04       590 DEALKPCPRCQSPAKYQPhKKRGLCSRlACGFDFCVLCLCAYHGSEDCRRG 640 Norway rat

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