Conserved Protein Domain Family
BRcat_RBR_ANKIB1

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cd20346: BRcat_RBR_ANKIB1 
BRcat domain found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
ANKIB1 is an RBR-type E3 ubiquitin-protein ligase that may function as part of the E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates. It contains N-terminal ankyrin repeats, and an RBR domain that was previously known as RING-BetweenRING-RING domain or TRIAD [two RING fingers and a DRIL (double RING finger linked)] domain. Based on current understanding of the structural biology of RBR ligases, the nomenclature of RBR has been changed to RING1-BRcat (benign-catalytic)-Rcat (required-for-catalysis) recently. The RBR domain uses an auto-inhibitory mechanism to modulate ubiquitination activity, as well as a hybrid mechanism that combines aspects from both RING and HECT E3 ligase functions to facilitate the ubiquitination reaction. This model corresponds to the BRcat domain of ANKIB1 that adopts the same fold as the Rcat domain while lacking the catalytic cysteine residue and ubiquitination activity.
Statistics
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PSSM-Id: 439007
Aligned: 93 rows
Threshold Bit Score: 74.6026
Created: 30-Sep-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C H CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #    #                              #  #    #  #     #    #        
Q9P2G1        409 IKAFVEnNPAIKWCPtPGCDRAVRLtkqgsntsgsdtlsfpllraPAVDC-GKGHLFCWECLGEa-HEPCDCQTWKNWLQ 486  human
XP_002776890  383 AQNYVDvSKDVRWCPaPGCGRSVKLepvn-------------saaTTVRC-SCGHEFCFSCLKDp-HEPAKCGQLEEFDK 447  Perkinsus mar...
XP_004340210  236 LSAYVDdHPLLTWCPaAGCGRAIKItpg--------------ptnVGVLC-DCQHLFCFECGQEa-HAPATCGMLVAWKA 299  Acanthamoeba ...
CEP03701      219 DAFVQGnRTKMKWCPnPDCDKVIENrtg---------------geVEIEC-RCGYVFCFKCGLEg-HRPCSCELVQQWLK 281  Plasmodiophor...
XP_001746136  196 IESYVQqQPSLKWCPtPNCNTVVERrfaesd---------aeaqdQSVTCgVCNEVFCFACGVF--HVPATCEMMREFQT 264  Monosiga brev...
Q23FV5        191 GRVYCSeSKTMKWCPaPGCDFAVENthf---------------thQYVQCiQCNTSFCFKCGKEh-HSPCTCDMVHEWEL 254  Tetrahymena t...
XP_002673398  300 IDSYVGsSYRLKWCPnPGCDGPYAIkklc------------deslYIAQC-KCGEECCFQCDKDp-HFPCSCDVYKRFLT 365  Naegleria gru...
XP_002680229  287 INSFMTnSHRMKWCS-NNCKFAIKKecd--------------enlYYCKC-KCDREFCFHCDQDp-HYPATCEMMKRFIS 349  Naegleria gru...
XP_641886     289 AQTYVDqNPNMRWCPaPKCGNALKAdsq---------------teATALC-SCGFKICFKCKQEs-HFPADCEKMKHWKK 351  Dictyostelium...
Q6C062        223 CTRYVRaHNDMKWCPaPDCGKAVKAnisvt----------desviPIAEC-NCHQQFCLACNIDedHLPCPCKVAARWLE 291  Yarrowia lipo...
Feature 1          
Q9P2G1        487 K 487  human
XP_002776890  448 A 448  Perkinsus marinus ATCC 50983
XP_004340210  300 K 300  Acanthamoeba castellanii str. Neff
CEP03701      282 K 282  Plasmodiophora brassicae
XP_001746136  265 A 265  Monosiga brevicollis MX1
Q23FV5        255 K 255  Tetrahymena thermophila SB210
XP_002673398  366 I 366  Naegleria gruberi strain NEG-M
XP_002680229  350 F 350  Naegleria gruberi strain NEG-M
XP_641886     352 K 352  Dictyostelium discoideum AX4
Q6C062        292 K 292  Yarrowia lipolytica

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