Conserved Protein Domain Family
BRcat_RBR_RNF217

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cd20342: BRcat_RBR_RNF217 
BRcat domain found in RING finger protein 217 (RNF217)
RNF217, also termed IBR domain-containing protein 1 (IBRDC1), is a transmembrane (TM) domain-containing RBR-type E3 ubiquitin-protein ligase mainly expressed in testis and skeletal muscle with different splice variants. It interacts with the anti-apoptotic protein HAX1, and is adjacent to a translocation breakpoint involving ETV6 in childhood acute lymphoblastic leukemia (ALL). RNF217 contains a RBR domain followed by TMs. The RBR domain was previously known as RING-BetweenRING-RING domain or TRIAD [two RING fingers and a DRIL (double RING finger linked)] domain. Based on current understanding of the structural biology of RBR ligases, the nomenclature of RBR has been corrected as RING-BRcat (benign-catalytic)-Rcat (required-for-catalysis) recently. The RBR (RING1-BRcat-Rcat) domain use an auto-inhibitory mechanism to modulate ubiquitination activity, as well as a hybrid mechanism that combines aspects from both RING and HECT E3 ligase function to facilitate the ubiquitination reaction. The family corresponds to the BRcat (benign-catalytic) domain that adopts the same fold as the Rcat domain while lacking the catalytic cysteine residue and ubiquitination activity.
Statistics
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PSSM-Id: 439003
Aligned: 26 rows
Threshold Bit Score: 92.0475
Created: 30-Sep-2015
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C C C H CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                #  #                               #  #    #  #    #    #               
Q8TC41       338 RIDSSTKPCPQCKHFTTFkkkghip------tpsrsesKYKIQCpTCQFVWCFKCHSPWHEGVnCKEYKKGDKLLr-HWA 410 human
KPM05297     222 SESDRSKPCPRCNKIFSLsfkhqekikrqrkmflfkhiLMLVKCdACQLDWCFKCHSPWHQGIsCKDYVKGDSLLk-TWA 300 Sarcoptes scabiei
XP_022091132 259 NSDPDQKTCPRCNHVANFhrdvlis------khkshpdEQKVTC-LCGMLWCFRCHSPWHENItCKQYQRGDRLLk-EWA 330 crown-of-thorns...
XP_011404683 190 ENDPTKKTCPNCCLITERndlpeyk------lkpptpeDYNITCdKCSFQWCFSCHSPWHEGIsCKAYHQGDQQFh-KWT 262 Amphimedon quee...
RMX47769     291 EQNPGIKICPGCSRIYQHpdlekver-----ekvsrpeVMKVTCsKCRLVWCFACQAPWHHGLtCNEFCKGDKSLk-IWA 364 Pocillopora dam...
PAA62579     168 ANGPLRKTCPGCACPTELsaka-------------wrrPLQVECsSCGLVWCFPCHAPMHRGVtCRQFRASDQELl-AWS 233 Macrostomum lig...
PAA75038     288 GNSSSERDCPRCSCLTQRpsrrmrlrn---grwqkehgGVTVKCaQCDYVWCFDCHSPAHPGLsCRRFRSGVHLLe-DWA 363 Macrostomum lig...
PAA71740     334 ERLPDAKTCPDCGHVCRRdqd---------------sgVNDVECeACGFAWCFACHGPHHPGRrCPDSADSDGQLltAWS 398 Macrostomum lig...
PAA88544     421 NGDPNKKTCPQCNMVTKNpneka----------skrlgGELTRCqRCEFSWCFRCHSPPHPNMsCSANSSGKQMLr-DWG 489 Macrostomum lig...
XP_011404682 255 ENDGKKKTCPNCCEITEHslprr-----------akeaDLKIKCiSCNHEWCFKCHAPWHKDItCKKFQKGNKQFk-QWT 322 Amphimedon quee...
Feature 1          
Q8TC41       411 SE 412 human
KPM05297     301 KH 302 Sarcoptes scabiei
XP_022091132 331 KE 332 crown-of-thorns starfish
XP_011404683 263 RD 264 Amphimedon queenslandica
RMX47769     365 KN 366 Pocillopora damicornis
PAA62579     234 KR 235 Macrostomum lignano
PAA75038     364 KQ 365 Macrostomum lignano
PAA71740     399 RE 400 Macrostomum lignano
PAA88544     490 LE 491 Macrostomum lignano
XP_011404682 323 KG 324 Amphimedon queenslandica

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