5OOL,5OOM


Conserved Protein Domain Family
Complex1_LYR_MIEF1-MP

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cd20272: Complex1_LYR_MIEF1-MP 
LYR (leucine-tyrosine-arginine) motif found in mitochondrial elongation factor 1 microprotein (MIEF1-MP) and similar proteins
MIEF1-MP, also called alternative mitochondrial elongation factor 1 (MIEF1) protein (AltMIEF1), or MIEF1 upstream open reading frame protein, is involved in the regulation of mitochondrial fission mediated by dynamin-1-like protein (DNM1L). It positively regulates mitochondrial translation. MIEF1-MP belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus.
Statistics
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PSSM-Id: 380767
Aligned: 16 rows
Threshold Bit Score: 68.8349
Created: 4-Apr-2019
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 19 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface [polypeptide binding site]
Evidence:
  • Structure:5OOL; Homo sapiens MIEF1-MP interacts with MALSU1 and NDUFAB1 within a native assembly intermediate of the human mitochondrial ribosome, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #  ##  ##  #    ###  # #   ####                 #  ##   
5OOL_v         7 EAVLSLYRALLRQGRq-LRYTDRDFYFASIRREFRKNQKLEdAEARERQLEKGLVFLNG 64  human
XP_813979    110 QQACTLYRQLLKAGHaqLRVTDKAYYVRKLRREFEVTARQTsARVRGIMYERGQWMLLN 168 Trypanosoma cruzi strain CL Brener
Q16IE3        10 RLILRLYRDLRRYGSq-LQFTDQEYFLQRVRREFDQNRTLCdPKEIEFCYKVIQSSCMI 67  yellow fever mosquito
XP_002611081   6 SAVLSLYKKLLRQGRy-LQYTDQDFYRASIQQEFRKHMHQDdPEQREFQLKKGQKFLET 63  Florida lancelet
KXJ22251      10 RMVINLYRSLLKEGRa-LRYTDKGYYRQEIRKEFERQRDEVdIVKIKDQYEKGVYFIKT 67  Exaiptasia pallida
XP_016609882   8 TQILRLYRRLLSSSRt-LRYTDQDYFRFRIREAFRQNQDVTdSARQERLFKRGVFMLEN 65  Spizellomyces punctatus DAOM BR117
OTF80859      12 SCVRRLYKDLLRFGRneLQYTDKNYFYKRIRKEFHDNKNLNnPEDIEYYYKVIFKILYI 70  Euroglyphus maynei
OWF39465       6 SKALSLYRALIRKGHt-LRLTDKDFYLKRVRKEFEKNRNLAdEAQIQKCIEKGEELMKR 63  Yesso scallop
PIS91779      30 RAVITLYKELMRYAAq-LKLSDRDYVRKYIRQVFETNRTLTdPEALRFFYNKGLEVLKL 87  liver fluke
XP_023319833   1 MRGTGLYKQLIRYGQq-LQYTDKHFFYRRIRAEFEQNKNLQdKQAIQFQLGKKLDKSQV 58  Eurytemora affinis

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