Conserved Protein Domain Family
CASIMO1

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cd20246: CASIMO1 
Cancer Associated Small Integral Membrane Open reading frame 1 (CASIMO1)
The Cancer-Associated Small Integral Membrane Open reading frame 1 (CASIMO1), a small open reading frame (sORF)-encoded protein (also known as a microprotein), controls cell proliferation and interacts with squalene epoxidase (SQLE) modulating lipid droplet formation. CASIMO1 RNA is overexpressed predominantly in hormone receptor-positive breast tumors, and its knockdown has been shown to decrease proliferation in multiple breast cancer cell lines. Loss of CASIMO1 disturbs the organization of the actin cytoskeleton, leads to inhibition of cell motility, and stalls the cell cycle in the G0/G1 phase. CASIMO1 interacts with SQLE, a key enzyme in cholesterol synthesis and a known oncogene in breast cancer. This family contains two variants expressed on different chromosomes in humans, small integral membrane protein 5 (SMIM5) and small integral membrane protein 22 (SMIM22).
Statistics
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PSSM-Id: 380775
Aligned: 42 rows
Threshold Bit Score: 49.1155
Created: 29-Jul-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
K7EJ46         3 VSTEELEatVQEVLGRLKSHQfFQSTWDTVAFIVFLTFMg-----------------------tVLLLLLLVva------ 53  human
XP_012776296 116 SMDQQLQdiFRRVWTKLQALP-EATPVEVGAFAVLLLFIa-----------------------tVLFMILLSci------ 165 zebra mbuna
PWA21724       2 EAKQEFEsiLQRVWSKLQGLP-QAAPLESGAFSILLLFIa-----------------------tVLFLMLLScf------ 51  western mosquit...
XP_007429493   5 QFQKELSaiGYKLWLKLQRLP-KAEPLEIVCFFIIVLFIa-----------------------tMLSMMIIAc------- 53  Burmese python
GCF56260       5 DFQNELYtiGEKLLNKFQRLP-KGDILEIAFFFVIVLFIg-----------------------tILVMTIIAc------- 53  Paroedura picta
XP_020660765   9 DFQNELYtiGNKLWLKLQRLP-KAEPLEIVSFLVVILFIa-----------------------tVLLMMIIAc------- 57  central bearded...
PIO28996       5 SIQEEVAkmGEKLLTKLSQIP-QADTVEIISFTIIIVFIa-----------------------aVLVVAIIAc------- 53  American bullfrog
OCT60686       5 DLLKEMDkaGQRLLVKLKDLP-RADTSHILAFAILLIFIv-----------------------aVLLMVSLAcc------ 54  African clawed ...
XP_015819227  80 DLREELLnkLHEVWIKLQGLP-QASPLEQGAFAVVILFVg-----------------------aFLFMIVIGc------- 128 turquoise killi...
XP_024259154   3 DAREEMLtlLQKLWAKLQGLP-TASPLEMGAFAVLVLFIgcelndtqrkavfeiaedllehqffIRTMCLSAdaskemhv 81  Chinook salmon
K7EJ46        54 -------hCCCCSSPgp---rRESPRKVSP 73  human
XP_012776296 166 -------hCCCFTKP------KHQPSRVQP 182 zebra mbuna
PWA21724      52 ------hcCCCGGKP------KYQSSRVQP 69  western mosquitofish
XP_007429493  54 -------sFCCSRCGdgspkpKGKKIHVQP 76  Burmese python
GCF56260      54 -------sFCCFNCGsp--dpRGRKIRVEP 74  Paroedura picta
XP_020660765  58 -------sCCCARCCngrpqpKGRRIQVQP 80  central bearded dragon
PIO28996      54 -------sGCCCTNK------KRRTTRVQP 70  American bullfrog
OCT60686      55 -------ySCCNGHTn-----KHRLSRVQP 72  African clawed frog
XP_015819227 129 -------mHCCCGKP------KYQASRVQP 145 turquoise killifish
XP_024259154  82 vevqdrvgECCKPVPi-----ATLHPMCQP 106 Chinook salmon
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