Conserved Protein Domain Family
T-box_TBR2

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cd20205: T-box_TBR2 
DNA-binding domain of T-box brain protein 2 and related T-box proteins
TBR2 (also known as Eomesodermin, Eomes, or T-brain-2) is a member of the T-box family of transcription factors and is associated with neurogenesis, cardiogenesis and tumor immune response. This subfamily belongs to the T-box family of transcription factors which plays a multitude of diverse functions throughout development. The founding member of the T-box family is Brachyury (also known as TBXT, or T). T-box family members share a conserved DNA-binding domain (T-box) which binds DNA in a sequence-specific manner. Common features shared by T-box family members are DNA-binding and transcriptional regulatory activity, a role in development, and conserved expression patterns.
Statistics
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PSSM-Id: 410331
Aligned: 6 rows
Threshold Bit Score: 404.062
Created: 8-Mar-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
DNA bindinghomodimer
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:based on the structure of mouse TBX21 bound to DNA; TBX21 T-box monomers dimerize upon DNA binding forming a tight dimer

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    ##                                # #               
O95936       266 RAHVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNINGLNPTAHYNVFVEVVLADPNHWRFQGGKWVTCGKADNNMQ 345 human
P79944       253 RAQVFLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNITGLNPTAHYNVFVEVVLADPNHWRFQGGKWVTCGKADNNMQ 332 African clawed ...
NP_001308484 223 RAQVFLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNITGLNPTAHYNVFVEVVLADPNHWRFQGGKWVTCGKADNNMQ 302 chicken
NP_001077044 138 RAQVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNMTGLSLSAHYNVFVEIVLADPNHWRFQGGKWVTCGKADNNMQ 217 zebrafish
NP_034266    268 RAHVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNINGLNPTAHYNVFVEVVLADPNHWRFQGGKWVTCGKADNNMQ 347 Mus musculus
BAA84718     222 RAQVFLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNMTGLNPTSHYNVFVEVVLADPNHWRFQGGKWVTCGKADNNMQ 301 Cynops pyrrhoga...
Feature 1                                   #  #               ##                                
O95936       346 GNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHKYQPRLHIVEVTEDgvedlnepskTQTFTFS 425 human
P79944       333 GNKVYVHPESPNTGAHWMRQEISFGKLKLTNNKGANNNSTQMIVLQSLHKYQPRLHIVEVSEDgvedlndsakNQTFTFP 412 African clawed ...
NP_001308484 303 GNKVYVHPESPNTGAHWMRQEISFGKLKLTNNKGANNNNAQMIVLQSLHKYQPRLHIVEVTEDgvedlndsskTQTFIFP 382 chicken
NP_001077044 218 GNKIYMHPESPNTGAHWMRQEISFGKLKLTNNKGANINTSQMIVLQSLHKYQPRLHIVEVSDDrser---dsnTQIFSFP 294 zebrafish
NP_034266    348 GNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHKYQPRLHIVEVTEDgvedlnepskTQTFTFS 427 Mus musculus
BAA84718     302 GNKVYVHPESPNTGAHWMRQEISFGKLKLTNNKGANNNSTQMIVLQSLHKYQPRLHIVEVSEDgaedlndstkTQTFVFP 381 Cynops pyrrhoga...
Feature 1               # #     #  #   ###  ##  
O95936       426 ETQFIAVTAYQNTDITQLKIDHNPFAKGFRD 456 human
P79944       413 ENQFIAVTAYQNTDITQLKIDHNPFAKGFRD 443 African clawed frog
NP_001308484 383 ETQFIAVTAYQNTDITQLKIDHNPFAKGFRD 413 chicken
NP_001077044 295 ENQFIAVTAYQNTDITQLKIDHNPFAKGFRD 325 zebrafish
NP_034266    428 ETQFIAVTAYQNTDITQLKIDHNPFAKGFRD 458 Mus musculus
BAA84718     382 ENQFIAVTAYQNTDITQLKIDHNPFAKGFRD 412 Cynops pyrrhogaster

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