Conserved Protein Domain Family
PWWP_NSD1_rpt2

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cd20164: PWWP_NSD1_rpt2 
second PWWP domain found in nuclear receptor-binding SET domain-containing protein 1 (NSD1) and similar proteins
NSD1, also called H3 Lysine-36 and H4 Lysine-20 specific histone-lysine N-methyltransferase, androgen receptor coactivator 267 kDa protein, androgen receptor-associated protein of 267 kDa, H3-K36-HMTase H4-K20-HMTase, Lysine N-methyltransferase 3B (KMT3B), or NR-binding SET domain-containing protein, is a lysine methyltransferase that preferentially methylates H3 on Lysine36 (H3-K36) and H4 on Lysine20 (H4-K20), which is primarily associated with active transcription. It plays a role in several pathologies, including but not limited to Sotos and Weaver syndromes, acute myeloid leukemia, breast cancer, neuroblastoma, and glioblastoma formation. It can alter transcription by interacting with the protein NSD1-interacting zinc finger protein 1 (NIZP1). It also mitigates caspase-1 activation by listeriolysin o (LLO) in macrophages, and requires functional LLO for the regulation of IL-1beta secretion. Moreover, NSD1 regulates RNA polymerase II (RNAP II) recruitment to bone morphogenetic protein 4 (BMP4). NSD1 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-proline (PWWP) domains, five plant homeodomain (PHD) fingers, and an NSD-specific Cys-His rich domain (C5HCH). The SET domain is responsible for histone methyltransferase activity. The PWWP and PHD domains are involved in protein-protein interactions. This model corresponds to the second PWWP domain. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438992
Aligned: 7 rows
Threshold Bit Score: 215.894
Created: 9-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Feature 1:putative methyl-histone binding site [polypeptide binding site]
Evidence:
  • Comment:the aromatic residues form the three-walled methyl-lysine cage that directly participate in histone methylated lysine binding and recognition.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #  #                           #                                    
Q96L73       1755 HYREIVWVKVGrYRWWPAEICHPRAVPSNidkmrHDVGEFPVLFFGSNDYLWTHqARVFPYMEGDVSSKDkmgKGVDGTY 1834 human
KFO91035      100 HYKEVVWVKVGrYRWWPAEICHPRTIPVNiqkmkHDIGEFPVLFFGSKDYLWTHqARVFPYMEGDVSSKDkmgKGVDGIY 179  Buceros rhino...
XP_005992408 2007 HYKEVVWVKVGgYRWWPAEVCHPKNIPPNiqkmkHDIGEFPVHFFGSKDYLWTHqARVFPYMEGDVSSKDkmgKATDGTY 2086 coelacanth
PIO35803      278 HYKEVVWVKVGrYRWWPAEVCHPKSIPTNimkmkHDIGEFPVLFFGSKDYLWTHqARVFPYMEGDALNKDkmsKGVDAVY 357  American bull...
KTG44195      425 HYKEVVWVKVGrYRWWPAEVSNPKDIPENivrmrHDVGEFPVLFFGSNDYLWTYqARVFPYMEGDANSKEkmgKGVDSTY 504  common carp
XP_007898581  894 HYKDIIWVKLGsYRWWPAEICHPRSVPTNiqnmkHEIGEFPVHFFGSNDYFWTHrARVFPYMEGDKGCKDnkiKGLSKAF 973  elephant shark
XP_007908405 1170 RYKDIIWVKLGrYRWWPAEVCHPKNVPTNiqkmkHEIGEFPVRFFGSNDYFWTYqARVFSYMEGDKGSKDktcKGLNSIF 1249 elephant shark
Feature 1                         
Q96L73       1835 KKALQEAAARFEELKA 1850 human
KFO91035      180 KKALQEAAVRFEELKA 195  Buceros rhinoceros silvestris
XP_005992408 2087 KKALQEAAVRFEELKA 2102 coelacanth
PIO35803      358 KKGLMEAAERFEELKA 373  American bullfrog
KTG44195      505 KKALEEAAVRFKELQA 520  common carp
XP_007898581  974 KKALQEAGDRFQDLKA 989  elephant shark
XP_007908405 1250 KKALQEAAERFEELKA 1265 elephant shark

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