5Y1Z,5B73,4COS


Conserved Protein Domain Family
PWWP_PRKCBP1

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cd20160: PWWP_PRKCBP1 
Click on image for an interactive view with Cn3D
PWWP domain found in protein kinase C-binding protein 1 (PRKCBP1) and similar proteins
PRKCBP1, also called cutaneous T-cell lymphoma-associated antigen se14-3 (CTCL-associated antigen se14-3), Rack7, or zinc finger MYND domain-containing protein 8 (ZMYND8), is a novel receptor for activated C-kinase (RACK)-like protein that may play an important role in the activation and regulation of PKC-beta I, and the PKC signaling cascade. It also has been identified as a formin homology-2-domain containing protein 1 (FHOD1)-binding protein that may be involved in FHOD1-regulated actin polymerization and transcription. Moreover, PRKCBP1 may function as a REST co-repressor 2 (RCOR2) interacting factor. They form a RCOR2/ZMYND8 complex which might be involved in the regulation of neural differentiation. PRKCBP1 contains a plant homeodomain (PHD) finger, a bromodomain, and a proline-tryptophan-tryptophan-proline (PWWP) domain. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438988
Aligned: 49 rows
Threshold Bit Score: 126.141
Created: 9-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Residues between Bromo and PWWP domain fold into an uncharacterized zinc finger.
  • Structure:5Y1Z; Homo sapiens PRKCBP1 binds Zn2+ ion.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #   #                                                                         
5Y1Z_C        190 EPCSNPHPLVWAKLKGFPFWPAKALRDk--DGQVDARFFGQHDRAWVPINNCYLMSKEIPf--SVKKTK-------SIFN 258  human
KFM57511       32 EVCHKPHPLVWAKLKGFPYWPAKVVRIv--DGNVDARFFGAHDRAWVPVTQCYHLSKEMPt-tSKPKKK-------GNYE 101  Stegodyphus m...
XP_023219782  239 EPCRKPHTLVWAKLKGFPIWPAKAVKSa--NGNVDVRFFGGHERAWVPVGHVYFLSRDPPq--AITSQK-------KNFE 307  bark scorpion
KAE9430290    225 EPCTTPHILVWAQLSGFPYWPGKVMRHv-nGDMVDVRFFGDHSRANVPVTSCFLYSRLMPc--AVKKNH-------PKIA 294  Apolygus lucorum
XP_014279838  306 EPCDKPHILVWARLKGFPYWPCKVMKAn--GTNVDVRFFGDHNKSLVPVECCYLYSKQMP---SKQKKV-------DELE 373  brown marmora...
XP_014244073  397 EPCAKPHLLVWARLKGYPYWPGKVMKVh--GPEVDVRFFGDHNRSMVPLANIFLFSKRPPy--RIPVRHt------QSFE 466  bed bug
KFM63150      243 RICKQPHTIIWAKLKGFPYWPAKSLKVv--DDTADVRFFGTHDKAFVPVNNCFLMSREYPt--PKTPKQ-------NKFH 311  Stegodyphus m...
KRX95049      210 SVCEFPHTLVWALVEGYCFWPAKALKLqnnATEVMLLFFGSHEYASVPMENCYLLSLEPPwkiEDRRNQ-------KALK 282  Trichinella p...
KFB49073       39 EPCSRPHLLVWAKVRGFRFWPGKVMEVl-pNGRVDVHFFGTHNTATIRASECLVYSPQDP---TGRPCRt------KKWR 108  Anopheles sin...
XP_015922634  261 NICKIPHPLVWAKVKGYSYWPAKCLKVs--NQKAHVRFFHTHQIACVPLSNVLAMSEDYPs--NSSKKQdkksrnnIDFV 336  common house ...
Feature 1                               
5Y1Z_C        259 SAMQEMEVYVENIRRKFGVFNY 280  human
KFM57511      102 AALHELNVHVHSLIQKFGTFEY 123  Stegodyphus mimosarum
XP_023219782  308 IAIQEVDLHIKLLTQRFGGYEY 329  bark scorpion
KAE9430290    295 DGIEEAEQHVKRLRRLYGNFYY 316  Apolygus lucorum
XP_014279838  374 IAIKEASQHIKRLEERFHVFQY 395  brown marmorated stink bug
XP_014244073  467 EGKEEVQEHIEKLINIYGNFEY 488  bed bug
KFM63150      312 DAMEELNEYISRYNKEIGTFSF 333  Stegodyphus mimosarum
KRX95049      283 VALDEMQRHVEELHKNKLDFQY 304  Trichinella pseudospiralis
KFB49073      109 KAIVEVNQHLAKLAAQFGDVNI 130  Anopheles sinensis
XP_015922634  337 MAMGELEAYVGIFKDHYGKFPY 358  common house spider

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