1OZ2,3OQ5,1OYX,2RHU,2RI2,2RI3,2RI5,2RJC


Conserved Protein Domain Family
MBT_L3MBTL1_rpt1

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cd20131: MBT_L3MBTL1_rpt1 
Click on image for an interactive view with Cn3D
first malignant brain tumor (MBT) repeat found in Lethal(3)malignant brain tumor-like protein 1 (L3MBTL1)
L3MBTL1, also called L(3)mbt-like, or L(3)mbt protein homolog, is a Polycomb group (PcG) protein that functions as a 'reader' of a network of post-translational modifications by specifically recognizing and binding mono- and dimethyllysine residues on target proteins. It acts as a chromatin compaction factor by binding mono- and dimethylated histone H1b/HIST1H1E at 'Lys-26' (H1bK26me1 and H1bK26me2) and histone H4 at 'Lys-20' (H4K20me1 and H4K20me2), leading to condensed chromatin and repressed transcription. L3MBTL1 contains three MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the first MBT repeat that contains the semi-aromatic cage and may bind methylated lysine residues.
Statistics
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PSSM-Id: 439121
Aligned: 14 rows
Threshold Bit Score: 215.898
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
methyllysine
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:methyllysine peptide binding site [polypeptide binding site]
Evidence:
  • Comment:based on structures of MBT domains with bound methylated lysine peptides or chemical probes
  • Comment:MBT repeat proteins use a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               #  #  # #               #  #   #                         
1OZ2_A        29 FQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQ 108 human
3OQ5_A        40 FQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQ 119 human
1OYX_A        29 FQDSQAVTHNKNGFKLGXKLEGIDPQHPSXYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQ 108 human
2RI3_A        25 FQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSEXHDFWVNANSPDIHPAGWFEKTGHKLQ 104 human
2RI5_A        25 FQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSEXHDFWVNANSPDIHPAGWFEKTGHKLQ 104 human
2RJC_A        26 FQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQ 105 human
Q9Y468       293 FQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQ 372 human
E1C2V1       319 FQDYQVASQHKNGFKVGMKLEGIDPQHPSMYFILTVAEVCGYRMRLHFDGYSECHDFWLNADSPDIHPAGWFEETGHKLQ 398 chicken
XP_014342931  57 FRESQSFPLNKNNFKAGMKLEGIDPQHPSMYFVLTVAEVCGYRIRLHFDGYSECHDFWVNADCPNIHPTGWCEKTGHKLH 136 coelacanth
XP_007883032 324 FRECQLFPQNKNSFRVGMKLEGIDPTHPSMYFVLTVSEVCGYRLRLHFDGYSECHDFWVNADSLDIHPAGWCEKTGHRLY 403 elephant shark
Feature 1                                     
1OZ2_A       109 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 137 human
3OQ5_A       120 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 148 human
1OYX_A       109 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 137 human
2RI3_A       105 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 133 human
2RI5_A       105 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 133 human
2RJC_A       106 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 134 human
Q9Y468       373 PPKGYKEEEFSWSQYLRSTRAQAAPKHLF 401 human
E1C2V1       399 PPKGYKEEEFSWTNYLKITKAQAAPKHLF 427 chicken
XP_014342931 137 LPRGYKEEEFTWTNYLRLTKAQVAPKHLF 165 coelacanth
XP_007883032 404 PPKGYKEEEFKWANYLRITKSQAAPKQLF 432 elephant shark

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