4C5E,3H6Z


Conserved Protein Domain Family
MBT_dSfmbt_rpt3

?
cd20125: MBT_dSfmbt_rpt3 
Click on image for an interactive view with Cn3D
third malignant brain tumor (MBT) repeat found in Drosophila melanogaster Polycomb protein Sfmbt (dSfmbt) and similar proteins
dSfmbt, also called Scm-like with four MBT domain-containing protein 1, is a Polycomb group repressor involved in epigenetic regulation of gene expression. dSfmbt contains four MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the third MBT repeat that does not seem to contain a semi-aromatic cage and may not bind methylated lysine residues.
Statistics
?
PSSM-Id: 439115
Aligned: 6 rows
Threshold Bit Score: 197.381
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4C5E_A        269 FVEGMKLEAVDPLNlsSICPATVMAVLkFGYMMIRIDSYQPDas-----gSDWFCYHEkSPCIFPAGFCSVNNISVTPPN 343  fruit fly
3H6Z_A        268 FVEGMKLEAVDPLNlsSICPATVMAVLkFGYMMIRIDSYQPDas-----gSDWFCYHEkSPCIFPAGFCSVNNISVTPPN 342  fruit fly
Q9VK33        798 FVEGMKLEAVDPLNlsSICPATVMAVLkFGYMMIRIDSYQPDas-----gSDWFCYHEkSPCIFPAGFCSVNNISVTPPN 872  fruit fly
ROT61230      535 FAEGMKLEAIDPLNlsAICVATVMKVLhNNYLMIRIDSYESDnt-----cSDWFCYHAtSPCIFPAGFCEMNNITLTPPR 609  Pacific white...
XP_021954595  347 LKAGMKLEAIDPLNlsAICAATIKKVLrRGYVMVRIDCYDDDss-----gLDWFCYHIsSNSVFPCGFSRTNGVVLTPPN 421  Folsomia candida
EFX80993      352 FKEGMKLEAVDPLNldHICVASVVKVLrQGYLMIRIDRQEADagddqvedPGEFCYHSsSACIAPPGFCEANAITLKPPE 431  common water ...
4C5E_A        344 GYdsrtFTWEGYLRDTGavaAGQHLFHRIIPD 375  fruit fly
3H6Z_A        343 GYdsrtFTWEGYLSDTGavaAGQHLFHDIIPD 374  fruit fly
Q9VK33        873 GYdsrtFTWEGYLRDTGavaAGQHLFHRIIPD 904  fruit fly
ROT61230      610 GYeg-qFLWYAYLKKTQataAPPALFSREIPS 640  Pacific white shrimp
XP_021954595  422 GYdkatFDWDEYFKQNDctaAPIKPKEKVLPH 453  Folsomia candida
EFX80993      432 DYeg-rFRWGDYLRQNKatpAPESLFGGRDEN 462  common water flea
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap