Conserved Protein Domain Family
MBT_SFMBT1_rpt3

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cd20115: MBT_SFMBT1_rpt3 
third malignant brain tumor (MBT) repeat found in Scm-like with four MBT domains protein 1 (SFMBT1)
SFMBT1, also called renal ubiquitous protein 1, is a transcriptional repressor protein that selectively binds the N-terminal tail of histone H3 and functions as a chromatin reader in regulating epigenetic silencing and the myogenic gene program. It mediates the recruitment of corepressor complexes to target genes, followed by chromatin compaction and repression of transcription. SFMBT1 contains four MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the third MBT repeat that does not contain a semi-aromatic cage and may not bind methylated lysine residues.
Statistics
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PSSM-Id: 439105
Aligned: 4 rows
Threshold Bit Score: 196.626
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9UHJ3       273 HTFSVNMKLEAVDPWSPFGISPATVVKVFDEKYFLVEMDDLrpe---nhaRRSFVCHADSPGIFPVQWSLKNGLHISPPP 349 human
XP_021335466 276 HCFTEGMKLEAVDPAAPFTISPATVAKVFNEQFFLVLMDDMrdeaqkeggAHSFLCHRDSPGIFPTQWSLKNGVKLSPPP 355 zebrafish
XP_014341449 273 HHFSAGQKLEAIDPTAPFIISPATVTKVLNEKFFLVEIDDLrpd---sasDGSFVCHMNSAGIFPVHWSLKNGLHLTPPT 349 coelacanth
XP_015148247 274 HSFSEGMKLEAVDPMAPFVISPATVLKVYNEKYFMIEIDDLrpe---ratSQSYICHVNSAGIFPVQWSLKNGIHLSPPP 350 chicken
Q9UHJ3       350 GYpSQDFDWADYLKQCG 366 human
XP_021335466 356 GFqGQDFDWADYLKQCE 372 zebrafish
XP_014341449 350 GYpGQDFDWADYLKQCG 366 coelacanth
XP_015148247 351 GYpGQDFDWADYLKQCG 367 chicken
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