2P0K


Conserved Protein Domain Family
MBT_SCMH1_rpt1

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cd20105: MBT_SCMH1_rpt1 
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first malignant brain tumor (MBT) repeat found in Polycomb protein sex comb on midleg homolog 1
Sex comb on midleg homolog 1 (SCMH1) is a homolog of Drosophila Sex comb on midleg (Scm). It is a component of PRC1 (Polycomb repressive complex 1), which acts as an E3 ubiquitin ligase, both for histone H2A to silence transcription and for geminin to regulate its stability. SCMH1 provides the complex with an interaction domain for geminin. It contains two MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the first MBT repeat that does not contain a semi-aromatic cage and may not bind methylated lysine residues.
Statistics
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PSSM-Id: 439095
Aligned: 7 rows
Threshold Bit Score: 292.283
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2P0K_A         1 HFTWDKYLKETcsvpapvHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVD 80  human
RLV90414      28 HFTWEKYLKETcaipapaHCFKQSYTPPANEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVD 107 Gouldian finch
XP_014342231  36 HFSWDRYLKETgaaaapvHCFKQSCVPPVNEFKIGMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVD 115 coelacanth
XP_007892947  36 HFSWDKYLKETgavaalsQCFKQSFVPPVNEFKIGMKLEAQDPRNVTSTCIATVVGITGARLRLRLDGSDNKNDFWRLVD 115 elephant shark
NP_001087408  30 HFSWEKYLKETgsqpappHCFRQSCSPPSNDYKIGMKLEAQDPRNTTSTCIASVVGLTGARLRLRLDGSDNKNDFWRLVD 109 African clawed ...
Q96GD3        27 HFTWDKYLKETcsvpapvHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVD 106 human
CDQ72648      37 HFSWDKYLKETgasaapaHCFRQGATPPVNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVD 116 rainbow trout
2P0K_A        81 SAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHK 131 human
RLV90414     108 SAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHK 158 Gouldian finch
XP_014342231 116 SLEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFQK 166 coelacanth
XP_007892947 116 SSEIQPIGNCEKNAGMLQPPLGFRLNASSWPMFLLKTLSGAEMAPVRIFHK 166 elephant shark
NP_001087408 110 SSEIQPIGTCEKSGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPAKVFHK 160 African clawed frog
Q96GD3       107 SAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHK 157 human
CDQ72648     117 SSEIQPIGNCEKNAGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPARIFHK 167 rainbow trout
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