4L59,1OZ2,4FL6


Conserved Protein Domain Family
MBT_L3MBTL1-like_rpt1

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cd20101: MBT_L3MBTL1-like_rpt1 
Click on image for an interactive view with Cn3D
first malignant brain tumor (MBT) repeat found in the Lethal(3)malignant brain tumor-like protein 1 (L3MBTL1)-like family
The L3MBTL1-like family includes L3MBTL1, L3MBTL3, and L3MBTL4. L3MBTL1, also called L(3)mbt-like, or L(3)mbt protein homolog, is a Polycomb group (PcG) protein that functions as a 'reader' of a network of post-translational modifications by specifically recognizing and binding mono- and dimethyllysine residues on target proteins. It acts as a chromatin compaction factor by binding mono- and dimethylated histone H1b/HIST1H1E at 'Lys-26' (H1bK26me1 and H1bK26me2) and histone H4 at 'Lys-20' (H4K20me1 and H4K20me2), leading to condensed chromatin and repressed transcription. L3MBTL3, also called L(3)mbt-like protein 3, or MBT-1, is a PcG protein that recognizes mono- and dimethylated lysine residues on histone tails. It also acts as a methyl-binding protein that binds the K142-methylated DNMT1 and recruits a novel CRL4(DCAF5) ubiquitin ligase to degrade DNMT1. L3MBTL4, also called L(3)mbt-like protein 4, or L3mbt-like 4, is a PcG protein that may act as a tumor suppressor. Members of this family contain three MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the first MBT repeat that contains the semi-aromatic cage and may bind methylated lysine residues.
Statistics
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PSSM-Id: 439091
Aligned: 21 rows
Threshold Bit Score: 171.684
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
methyllysine
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:methyllysine peptide binding site [polypeptide binding site]
Evidence:
  • Comment:MBT repeat proteins use a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine.
  • Structure:4FL6; Homo sapiens L3MBTL3 binds UNC1215, a potent and selective chemical probe for methyllysine; contacts at 4A.
  • Structure:4L59; Homo sapiens L3MBTL3 binds UNC2533 through its first MBT repeat; contacts as 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                        #  #  # #               #  #   #                                 
4L59_A         32 YNKNGFKVGMKLEGVDPEHqsVYCVLTVAEVCGYRIKLHFDGYSdCYDFWVNAdALDIHPVGWCEKtGHKLHPPKGYKEe 111  human
4FL6_A         32 YNKNGFKVGMKLEGVDPEHqsVYCVLTVAEVCGYRIKLHFDGYSdCYDFWVNAdALDIHPVGWCEKtGHKLHPPKGYKEe 111  human
PIK46400      327 AKSHGFKPGMKLEGIDPKHpsLFCVLSVAEAKGFRLRLHFDGYSeCHDFWENVdSVNIMPVGWCERtGHKLALPKGHTPe 406  Japanese sea ...
EFX86265      290 YGKHGFRTGMKLEGIDPEHqsLFCVMTVAEIQGYRVRLHFDGYSdSHDFWLNAdSENLFHCGWCEKnGQKLRPPKHYDLa 369  common water ...
KXJ27544     2372 MPCEEFKKNMKLEAVDPKHpsYICVCTIVRVKGSRLRLHFDGWSeCYDFWTNSdSVDIFPMGWCEQnNQTLHPPRSFTRg 2451 Exaiptasia pa...
PAA49865      735 NRMSEFELGMVLEGVDPCHesLICCLSISEIQGCRLRLHFEGYTeLHDFWCSAdSPFLFPVGWAKHnGFPLQPPKGYEAg 814  Macrostomum l...
XP_002122746  331 LKPNNFKVGFLLEAIDPLNqsLFCAMSVVRVRGHRLRLQFLGYKdCYDIWVNSdSPFIFPCGFCERtGRKLAPPKVLDPe 410  vase tunicate
GAU94901      283 FDENKFKVGMQLEAIDPLHpgLYCVVVIKEIVAFRLRLRFVGFSsLYDFWVNAdSPFIFPPGWCSVnKKPLSPPRRGKVk 362  Ramazzottius ...
Q16MU8       1019 SGLNRFRIGMKLEAIDPENnsLFCVCSIVDVRGYRLKLTFDGYSrDYDFWVNAdSLDIFPAGWCQKtNRILQPPNGYDSd 1098 yellow fever ...
XP_030838673  424 LSKNLFKVGMKLEGIDPKHpsLFSVLTVMEIRGYRLRLHFDGYSeCYDFWVSSdSPDILPAGWCEKtGHKLLPPKGFQTd 503  
Feature 1                                                       
4L59_A        112 -------------------------eFNWQTYLKTCKAQAAPKSLF 132  human
4FL6_A        112 -------------------------eFNWQTYLKTCKAQAAPKSLF 132  human
PIK46400      407 -------------------------tFSWSVYVKETRSQAAPKHLF 427  Japanese sea cucumber
EFX86265      370 psqstssplppnqqqassqalthgrtFSWPQYLKFTSSAAAPRHLF 415  common water flea
KXJ27544     2452 -------------------------eFSWHKYLKKQGRNPAPAHLF 2472 Exaiptasia pallida
PAA49865      815 -------------------------sFNWFDYIMTNKLRAVPRCLF 835  Macrostomum lignano
XP_002122746  411 -------------------------tFSWNAYAERMPNFTIAPEEV 431  vase tunicate
GAU94901      363 --------------------------VDGIALLQLHNAANVTEKHL 382  Ramazzottius varieornatus
Q16MU8       1099 --------------------------FSWIKYLSEKQATPAPRHLF 1118 yellow fever mosquito
XP_030838673  504 --------------------------FSWTAYLKMTRSTSAPRHLF 523  

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