4C5E,3F70,3FEO


Conserved Protein Domain Family
MBT_dSfmbt-like_rpt3

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cd20099: MBT_dSfmbt-like_rpt3 
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third malignant brain tumor (MBT) repeat found in the Drosophila melanogaster Polycomb protein Sfmbt (dSfmbt)-like family
The dSfmbt-like family includes Drosophila melanogaster Scm-like with four MBT domain-containing protein 1 (dSfmbt), as well as its two vertebrate homologs, MBT domain-containing protein 1 (MBTD1) and Lethal(3)malignant brain tumor-like protein 2 (L3MBTL2). dSfmbt is a Polycomb group (PcG) repressor involved in epigenetic regulation of gene expression. MBTD1 and L3MBTL2, also called L(3)mbt-like protein 2, are putative PcG proteins that specifically bind to monomethylated and dimethylated 'Lys-20' on histone H4. L3MBTL2 also binds histone H3 peptides which are monomethylated or dimethylated on 'Lys-4', 'Lys-9' or 'Lys-27'. Members of this family contain four MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the third MBT repeat that does not seem to contain a semi-aromatic cage and may not bind methylated lysine residues.
Statistics
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PSSM-Id: 439089
Aligned: 14 rows
Threshold Bit Score: 120.097
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4C5E_A        269 FVEGMKLEAVDPLNl--sSICPATVMAVLk-FGYMMIRIDSYqpd-------------------------------asgS 314  fruit fly
PIK61213      116 FSVGMKMEVVDPLKl--gNICAATVMEVLe-EGYLMIAIDGCme---------------------------------dkS 159  Japanese sea ...
OTF74096     1311 FREGMKLEVVNPMDl--sQICVATVRKVLr-YNFLVLSIDEVnhdaqsslqrlqtspvrsssptvlfgsqsstspleleE 1387 Euroglyphus m...
XP_003747962  319 LKVGMKLEFFTPQCp--dAMCIGTIRKVLr-NHFLVVEADDVsap--------------------------------eeR 363  western preda...
B2D6M2        428 VKVGQKFELIDPLAqqfnNLHVASILKFCktEGYLIVGMDGPda----------------------------------lE 473  Caenorhabditi...
A0SQM0        369 LKVGQKFELLDPLSdlrqSFCVATIRKICktPGFLIISPDETes----------------------------------dD 414  Caenorhabditi...
XP_021951882  337 QEVGMKLETIDPYNl--nYIAAATVVKVLk-FGHMVISIESPtnitge-------------------------klagaqQ 388  Folsomia candida
RMX37647      611 FKVGMKFEAIDPFNp--sHVCVVTVIKVLr-FNYFVLGVDSL-------------------------------------A 650  Pocillopora d...
XP_030836926  506 FRINMKLEVVDPLRl--gTVCVATVMQVLr-EGYLMIGVDGCle---------------------------------dtN 549  
XP_012559766  504 FEIGMKLEALDPFNp--lCLTVASVVKILh-FNYFVVGLDGQ-------------------------------------E 543  Hydra vulgaris
4C5E_A        315 DWFCYHEkSPCIFPAGFCSVnNISVTPPNGYds--rtFTWEGYLRDTG 360  fruit fly
PIK61213      160 SWFCYHVtSPLLLPVGFCEHhKIPIVPPRGYen---rFDWVDYLKETQ 204  Japanese sea cucumber
OTF74096     1388 RMFCLHAsSPYILPAGFCKMfDIPLQTPTGYkr---eFNWVEYCQYSN 1432 Euroglyphus maynei
XP_003747962  364 LRMCVHAlSNCLYPAGYAQIaRIRLKKPPGYee--rcFRWKEYLDETR 409  western predatory mite
B2D6M2        474 DSFPIHInNTFMFPVGYAEKyNLELVPPDEFkg---tFRWDEYLEKES 518  Caenorhabditis elegans
A0SQM0        415 ESFPIHIdNHFMHPVGYAEKfGIKLDRLAGTep--gkFKWEGYLKEKQ 460  Caenorhabditis elegans
XP_021951882  389 NLYLCHIsSPHIFPCGFTNEvGIELIPPADRpshdkpFIWKDYFETTG 436  Folsomia candida
RMX37647      651 TYFVCHAnSINVFPCGWAKAhGLQLHPPRGDytq-eaFSWPEYLAKTG 697  Pocillopora damicornis
XP_030836926  550 SWFCCHCtSPALLPVGFCEYhKIDLQPPRGSds---nFDWVDYLRTTE 594  
XP_012559766  544 VFFICHSsSNSIFPVGWSKQhKVFLTPPKDMig--kpFDWDKYLLKCD 589  Hydra vulgaris
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