Conserved Protein Domain Family
MBT_SFMBT_rpt4

?
cd20096: MBT_SFMBT_rpt4 
fourth malignant brain tumor (MBT) repeat found in the Scm-like with four MBT domains protein (SFMBT) family
The SFMBT family includes SFMBT1 and SFMBT2. SFMBT1, also called renal ubiquitous protein 1, is a transcriptional repressor protein that selectively binds the N-terminal tail of histone H3 and functions as a chromatin reader in regulating epigenetic silencing and the myogenic gene program. It mediates the recruitment of corepressor complexes to target genes, followed by chromatin compaction and repression of transcription. SFMBT2, also called Scm-like with 4 MBT domains protein 2, is a transcriptional repressor of the HOXB13 gene. It is required for trophoblast maintenance and placenta development. It also negatively regulates cell migration and invasion in prostate cancer cells. Members of this family contain four MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the fourth MBT repeat that does not contain a semi-aromatic cage and may not bind methylated lysine residues.
Statistics
?
PSSM-Id: 439086
Aligned: 23 rows
Threshold Bit Score: 93.4574
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q9UHJ3        384 FKENMKLEAVNPILp----------eEVCVATITAVR--GSYLWLQLEGSkk---------------------------- 423  human
Q5VUG0        408 FTKNMKLEAVNPRNp----------gELCVASVVSVK--GRLMWLHLEGLqt---------------------------- 447  human
XP_002613598  371 FQKGMKLEVVNPHNh----------aEICVASITKVV--SRVMFVHLEGAkva--------------------------- 411  Florida lancelet
XP_002413083  381 FEPGQKLEAVNVHKp----------nEVCVAGVERVC--PPLVWLRLEPG------------------------------ 418  black-legged ...
VDP45786      184 TGRGFKLEAVDPSNs----------aQVCAATIARVV--RPFIWVHFDSYy----------------------------- 222  Soboliphyme b...
XP_018026813 1494 FSAGHKLEVVHPEDp----------sLICAATIAATT--GHLLWLRVDSLpnpgltsaeseassgngssqlsnlvkevdp 1561 Hyalella azteca
VDO47404      544 FLLGMKLEMVPPASicskahycdigpALCTATVTRVEy-PHLLWLLPDIPcienftnd---------------------- 600  Schistosoma m...
EFX87706      337 FSKGMAMEVVNPWKp----------tEICVGVITTIErsGTLLRIHMEKEsead-------------------------- 380  common water ...
PAA92499      413 FCLGEKLEMVSQEEpa---------nTLVPATITRFI--GRLMLLHLNHLpp---------------------------- 453  Macrostomum l...
PFX21618      409 FDIGMKLEAVDQTDp----------sTITVASVSQVV--GRTMWVLLEGYkn---------------------------- 448  Stylophora pi...
Q9UHJ3        424 -----------pIPECIVSVe-SMDIFPLGWCETnGHPLSTPRRA 456  human
Q5VUG0        448 -----------pVPEVIVDVe-SMDIFPVGWCEAnSYPLTAPHKT 480  human
XP_002613598  412 ---------ahtAQNIVMDVe-SMELFPVGWCETnGYPLSSPPKR 446  Florida lancelet
XP_002413083  419 ------------EERLVVPLr-SHQLFPVGWCASnGFPLRAPRDY 450  black-legged tick
VDP45786      223 -----------sCRSYVVDLrtSTDVFDCGWCAAnGYPLLSPFTA 256  Soboliphyme baturini
XP_018026813 1562 gvqhlfcdcekpNRILIEHIs-SLDVFPVGWAHSnHAPFVFPPPK 1605 Hyalella azteca
VDO47404      601 -----ekithyqSRPILVDAr-STDLYPVGWSEFvGHPLIPPSGY 639  Schistosoma margrebowiei
EFX87706      381 ---------gglPLEFLAPMs-SQELFPIGWCDDsGWSLVAPPVI 415  common water flea
PAA92499      454 -----------lSPPILVDMg-STSLFHVGWAELnGHRMSVPFCY 486  Macrostomum lignano
PFX21618      449 -----------dSVEHIYDVe-SLDLFPVGWCSMnGHPLVTPRVQ 481  Stylophora pistillata
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap