Conserved Protein Domain Family
MBT_SFMBT_rpt3

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cd20095: MBT_SFMBT_rpt3 
third malignant brain tumor (MBT) repeat found in the Scm-like with four MBT domains protein (SFMBT) family
The SFMBT family includes SFMBT1 and SFMBT2. SFMBT1, also called renal ubiquitous protein 1, is a transcriptional repressor protein that selectively binds the N-terminal tail of histone H3 and functions as a chromatin reader in regulating epigenetic silencing and the myogenic gene program. It mediates the recruitment of corepressor complexes to target genes, followed by chromatin compaction and repression of transcription. SFMBT2, also called Scm-like with 4 MBT domains protein 2, is a transcriptional repressor of the HOXB13 gene. It is required for trophoblast maintenance and placenta development. It also negatively regulates cell migration and invasion in prostate cancer cells. Members of this family contain four MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the third MBT repeat that does not contain a semi-aromatic cage and may not bind methylated lysine residues.
Statistics
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PSSM-Id: 439085
Aligned: 34 rows
Threshold Bit Score: 93.4753
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9UHJ3        275 FSVNMKLEAVDPWSpfGISPATVVKVFdEKYFLVEMDDLrpe--------------nhaRRSFVCHAdSPGIFPVQWSLK 340  human
ERG84852      246 FEVGMMLEVLDISNggVFYAGYVSEVLsPYYFLVRVSQSik----------------gpAPEMLCHRsHPYIFPVYWCAR 309  pig roundworm
XP_023327905  354 FKVGDRFEYLSNPEslTFHLGVVLSVI-EHILRIQVLDGs------------------gTPNILVSQrNLNMFPVGWCQT 414  Eurytemora af...
XP_026465688  232 FELGMQLEMLNPKTrsTFHNGIVSKIIdKYYFIVSLVDKngeye----------rnntvHNSWLCSIeHPYIFPIGWCSK 301  cat flea
VDP45786       38 FGTGMCLEMLDPDEkdEFYPAVVVDVInDYYFIVEIDRMpqnsastslsasltesppasSSRFVCHQhSPGLVPCGWCAR 117  Soboliphyme b...
VDD85751      237 FQENMSLEVLQASNggAFFAGHVTEIInSHYFTVKIAESls----------------gmEKTITCSKsHPQIFPSGWCQR 300  human pinworm
KHJ40607       17 LKSGYYLEVLHPIDrdAFYPAEVVSVLnNYYFVVQLFTDtvhdn-----------qpsnTQRFKLHKqSTGFAPMGWCAK 85   pig whipworm
KRX24085      175 LRKYMAFEMLDPREknCFFPAVVTKILnEYYFEVFLDRTpstekpv------nmdtvlpEDLYVVSKnSLGMVPIGYCEK 248  Trichinella n...
KJH49356      589 FKVGALVEVQDVEQraAIYPGHVTEIInSHFVKIVSLSSgk----------------seTREIVAHRgTYGVFPQGFCAS 652  bovine lungworm
PAV64368      303 ANKYAPLEVLSATGr-YFMYAYVMEVSdKYNFYIRYFDVy------------------gEREMFCTRnSPNIFPVGYAAS 363  Diploscapter ...
Q9UHJ3        341 nGLHISPPpgyp--------sqdFDWADYLKQCG 366  human
ERG84852      310 hNIRLTPPedyg--------adeFSWNTFREKCG 335  pig roundworm
XP_023327905  415 nNIELTPPplip--------ppsPALPPSIPEIP 440  Eurytemora affinis
XP_026465688  302 hDLQILQSndidser--ctykemFSAKSNAETLG 333  cat flea
VDP45786      118 nHVRLGKIe-------------nFNWSSYSKLSN 138  Soboliphyme baturini
VDD85751      301 hGLRLTPPs-------------vYYADSHLDYTG 321  human pinworm
KHJ40607       86 nHIRLGKEg-------------kFNWALFERKRH 106  pig whipworm
KRX24085      249 nGIPFAGLr-------------tFNWANYKRING 269  Trichinella nelsoni
KJH49356      653 iGYQLSVPfsnsrmkarglldseWSWKSYAADWG 686  bovine lungworm
PAV64368      364 iKQDLLPPasivgq----eereaFNWDTFRSTFL 393  Diploscapter pachys
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