Conserved Protein Domain Family
MBT_SFMBT_rpt1

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cd20093: MBT_SFMBT_rpt1 
first malignant brain tumor (MBT) repeat found in the Scm-like with four MBT domains protein (SFMBT) family
The SFMBT family includes SFMBT1 and SFMBT2. SFMBT1, also called renal ubiquitous protein 1, is a transcriptional repressor protein that selectively binds the N-terminal tail of histone H3 and functions as a chromatin reader in regulating epigenetic silencing and the myogenic gene program. It mediates the recruitment of corepressor complexes to target genes, followed by chromatin compaction and repression of transcription. SFMBT2, also called Scm-like with 4 MBT domains protein 2, is a transcriptional repressor of the HOXB13 gene. It is required for trophoblast maintenance and placenta development. It also negatively regulates cell migration and invasion in prostate cancer cells. Members of this family contain four MBT (malignant brain tumor) repeats. The MBT repeat is a protein module that recognizes methylated lysine residues on histones. MBT repeats contain a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine. This model corresponds to the first MBT repeat that contains a partially conserved semi-aromatic cage.
Statistics
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PSSM-Id: 439083
Aligned: 21 rows
Threshold Bit Score: 118.146
Created: 8-Jan-2019
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative
Feature 1:putative methyllysine peptide binding site [polypeptide binding site]
Evidence:
  • Comment:MBT repeat proteins use a semi-aromatic cage to accommodate methyllysine and show specificity towards the lower methylation states of lysine.
  • Comment:Not all MBT repeats contain the semi-aromatic cage that facilitate binding to methyllysine residues

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #  #        # #               #  #      #                          
Q5VUG0         71 QSNFQPGMKLEVANKNNp------dTYWVATIITTCGQLLLLRYCGYge-drRADFWCDVvIADLHPVGWCTQnNKVLMP 143  human
PIK54902      438 VSTVKPGMKVEAPNPPSaln--pyqTYWVASVVSACGTLLLLRYEGYge-drSGDFWCDLkSKVLHPVGWCARnGQMLQP 514  Japanese sea ...
XP_018917187   55 QSCFKEGMKIEVPHKDNa------eLHWVADIISVYGSLLRLRYVGVnd-dpSNIYWLDPaIHKVHRLGWCKDnGKPLIP 127  Bemisia tabaci
KPJ10197       30 NNGIKQGMLLEVCHKNNp------dIYWIAEITMVCGHLLRIKFIGA-----DTDFWCDIsNTKVHPLGWCGKyDELVEP 98   common yellow...
XP_009022443   32 QNGLKKGMVVEVANKNPa------gTFWVSIIVMSCGQLLMLKPACCndddsSFNFWCDMsTCDVKQTGWCRNtGNVLAP 105  Helobdella ro...
KDR06566       39 QNGLHEGMMLEIPSRVTp------nTYWIATIVMACGPLLRLRFVGQea-drTQDFWYDLtKVQVYPLGWCRDhHLRLQP 111  Zootermopsis ...
XP_012553804  108 ICGFQPGMKLEVPNRDYl------kTYWLAFVIRKAAPLILVRYEGFdd--sKSDFWLNTlSDDIHPVGWCARnKQALKP 179  Hydra vulgaris
XP_030827837  912 TCYVKFGMKVEVPNPIMtypi-hvkSYWVATIVALSGSLMLLRYDGWeegdrSGDFWWDLvSMEVHPIGWCARnGYVLTP 990  
XP_029828486   52 ESGLRPGMKLEVLSEGGp-------SYWLAAVVTTCGPLLSLRYLGAd---rAADFWCDLgANEVHPLGWCAQhQQPLRP 121  
XP_012559766  272 LSEVHHGLKVEVINDHSeqnndsdvCFWVATVINTDCNMMLLRYCGCpd--dTSDFWFDVrSKHLHPVGWCYRaRYRLVP 349  Hydra vulgaris
Feature 1                                      
Q5VUG0        144 PDAIk--------eKYTDWTEFLIRDLTG 164  human
PIK54902      515 PDSLl--------hKKLQWQQFLIFSLTG 535  Japanese sea cucumber
XP_018917187  128 PRSVsdasiaenpeEYLKGAETLSEEITG 156  Bemisia tabaci
KPJ10197       99 PDEIn--------eKCGDTIIDIMKKALL 119  common yellow swallowtail
XP_009022443  106 PADLid-------kIPKDYQPLLEKLVNE 127  Helobdella robusta
KDR06566      112 PSELl--------pKLLDYEAFAIRALQN 132  Zootermopsis nevadensis
XP_012553804  180 PKAIq--------hKESNWYQYLIKNLTG 200  Hydra vulgaris
XP_030827837  991 PNSLi--------hKPINWQEFLIQTLTG 1011 
XP_029828486  122 PQAVr--------dRHRDWEALLDQELQG 142  
XP_012559766  350 PAEIr--------nIISDWQKYIFQELSG 370  Hydra vulgaris

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