4B09


Conserved Protein Domain Family
REC_OmpR_BaeR-like

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cd19938: REC_OmpR_BaeR-like 
phosphoacceptor receiver (REC) domain of BaeR-like OmpR family response regulators
BaeR is part of the BaeSR two-component system that is involved in regulating genes that confer multidrug and metal resistance. In Salmonella, BaeSR induces AcrD and MdtABC drug efflux systems, increasing multidrug and metal resistance. In Escherichia coli, BaeR stimulates multidrug resistance via mdtABC (multidrug transporter ABC, formerly known as yegMNO) genes, which encode a resistance-nodulation-cell division (RND) drug efflux system. Members of this subfamily belong to the OmpR family of DNA-binding response regulators, which are characterized by a REC domain and a winged helix-turn-helix (wHTH) DNA-binding output effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.
Statistics
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PSSM-Id: 381165
Aligned: 11 rows
Threshold Bit Score: 191.822
Created: 19-Sep-2018
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[ED] [ED] [ED]Click to see conserved feature residue pattern help
Evidence:
  • Comment:based on metal binding site of other family members
  • Comment:signal transduction in two-component systems is mediated by metal ion dependent phosphorelay reactions between protein histidine kinases and phosphoaccepting receiver domains in response regulator proteins
  • Comment:for many receivers, Mg2+ is the preferred metal ion, but other divalent ions such as Mn2+ are also used

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                         ##                                          #                              
4B09_A                    12 RILIVEDEpkLGQLLIDYLRAasyAPTLISHGdqVLPYVRQTpPDLILLDLMLPGTdGLMLXREIRrf-sDIPIVMVTAk 90   Es...
igergo:WLH_01001          12 RILIVEDEpkLGQLLIDYLRAasyAPTLISHGdqVLPYVRQTpPDLILLDLMLPGTdGLTLCREIRrf-sDIPIVMVTAk 90   Es...
KEO61656                   6 RIMIIEDEpdLAEVLRDYLAQagmAVDILWDGthAVERVLAAqPDLVVLDIMLPGKdGLTICRELRak-sDVPIIMETAr 84   Th...
KPK25918                   6 RILIVEDEakIAELLRDYLQAanfAVSCLYQGdgVISAVKDNpPDLILLDVMLPGKdGMEICRAIRaf-sSVPIIMITAr 84   Ni...
XP_011565569              12 RILIVEDEpkLGQLLIDYLRAasyAPSLIGHGdqVLPYVRQTpPDLILLDLMLPGVdGLTLCREIRrf-sDVPIVMVTAk 90   di...
KGQ13989                 435 RILIVEDEpkLGQLLIDYLRAasyAPTLLTHGdqVLPYVRHTpPDLILLDLMLPGTdGLTLCKEIRrf-sEVPIVMVTAk 513  Be...
PKN12486                   4 EILIVEDEakLAELLRDYLQQagfAVSMISNGrdAIPAVRERaPDLILLDLMLPGRdGMEICRELRtf-sSVPVIMTTAr 82   De...
CDQ33518                   4 TILIVEDEpkIARLVADYLQQsgyATHHLAHGdeVMPWLAHHaPALILLDLMLPGTdGLTLCRHINdahpSLPVIMLTAr 83   Vi...
XP_018007382               8 RVLVVEDDprIAMLLVDYLRHeglQAHSLADGqlALNEIRHAvPDLLILDLGLPGLdGVSLCREVRqf-sDVPILMLTAr 86   Hy...
OIO68043                   8 HILIVEDEpdLANILHAYLLRdgfTATVIDNGaaAWTAIQNTpPDLVLLDVMLPEMdGISLLRQLRks-sNLPVILATAr 86   Ze...
PRJNA186035:EAE35_09020   12 RILIVEDEpkLGQLLIDYLRAasyAPTLINHGdkVLPYVRQTpPDLILLDLMLPGTdGLTLCREIRrf-sDIPIVMVTAk 90   Sa...
Feature 1                                                       
4B09_A                    91 iEEIDRLLGLeiGADDYIXKPYsPREVVARVKTIL 125  Escherichia coli str. K-12 substr. MG1655
igergo:WLH_01001          91 iEEIDRLLGLeiGADDYICKPYsPREVVARVKTIL 125  Escherichia coli O25b:H4
KEO61656                  85 vEEIDRLLGLelGADDYLCKPFsPRELVARIKAIL 119  Thioclava sp. DT23-4
KPK25918                  85 vEEIDRLIGLelGADDYICKPFsPREVVARVKAVL 119  Nitrospira bacterium SG8_3
XP_011565569              91 iEEIDRLLGLeiGADDYICKPYsPREVVARVKTIL 125  diamondback moth
KGQ13989                 514 iEEIDRLLGLeiGADDYICKPYsPREVVARVKTIL 548  Beauveria bassiana D1-5
PKN12486                  83 vEEIDRLLGLelGADDYICKPYsPREVVARVRAVL 117  Deltaproteobacteria bacterium HGW-Deltaproteoba...
CDQ33518                  84 vEEIDLLLGLelGADDYICKPFsPREVVARVKAVL 118  Virgibacillus halodenitrificans
XP_018007382              87 vDELDRLLGLnsGADDYVCKPFsPREVMARVQALL 121  Hyalella azteca
OIO68043                  87 vDELDRLLGLelGADDYVCKPYsPREVVARVKAVL 121  Zetaproteobacteria bacterium CG1_02_49_23
PRJNA186035:EAE35_09020   91 iEEIDRLLGLeiGADDYICKPYsPREVVARVKTIL 125  Salmonella enterica subsp. enterica serovar Mba...

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