Conserved Protein Domain Family
bHLH-O_DEC2

?
cd19750: bHLH-O_DEC2 
basic helix-loop-helix-orange (bHLH-O) domain found in differentially expressed in chondrocytes protein 2 (DEC2) and similar proteins
DEC2, also termed Class E basic helix-loop-helix protein 41 (bHLHe41), or Class B basic helix-loop-helix protein 3 (bHLHb3), or enhancer-of-split and hairy-related protein 1 (SHARP-1), is a bHLH-O transcriptional repressor involved in the regulation of the circadian rhythm by negatively regulating the activity of the clock genes and clock-controlled genes.
Statistics
?
PSSM-Id: 381593
Aligned: 6 rows
Threshold Bit Score: 187.504
Created: 9-Aug-2018
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putative dimerputative DNA
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens HES-1 (2MH3) forms a homodimer.
  • Comment:HLH region of bHLH forms homo- and heterodimers

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                 ## ### ## ##  ##  #       # ###  ## ## ### ##  #       
Q9C0J9        31 KPKRSMKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110 human
NP_001034196  31 KSKRGMKREEGKDAYKLPHRLIEKKRRDRINECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQKI 110 zebrafish
XP_006001768  31 KPKRGIKRDDSKEAYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110 coelacanth
XP_007907210   5 KSKRGLKRDDSKEAYKLPHRLIEKKRRDRINECISQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALSALTEQQHQKI 84  elephant shark
PKU36158      31 KPKRGVKRDESKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKI 110 Limosa lapponic...
NP_001027504  30 KPKRGLKRDESKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKGLTSLTEQQHQKI 109 tropical clawed...
Feature 1                    
Q9C0J9       111 IALQNGERSLKS 122 human
NP_001034196 111 IALQNGERSLKS 122 zebrafish
XP_006001768 111 IALQNGDQNMKS 122 coelacanth
XP_007907210  85 IALQSGDGSLKS 96  elephant shark
PKU36158     111 IALQNGERSMKS 122 Limosa lapponica baueri
NP_001027504 110 MALQNGEHALKS 121 tropical clawed frog

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap