Conserved Protein Domain Family
serpinA16_HongrES1-like

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cd19587: serpinA16_HongrES1-like 
serpin family A member 16, HongrES1 and similar proteins
HongrES1 is an epididymis-specific secretory protein and is encoded by the SERPINA16 gene. It is one of several potential decapacitation factors of rodents, including a 40-kDa glycoprotein, phosphatidylethanolamine-binding protein 1 (PEBP1), a cysteine-rich secretory protein 1, an acrosome-stabilizing factor, SVA, SVS2, and SPINKL. In humans, some potential decapacitation factors that have been reported are glycodelin-S, semenogelin I, a 130-kDa glycoprotein, and some mannosyl glycopeptides. Decapitation factors are removed from the sperm head surface during the capacitation process and are able to reverse sperm capacitation. The clade A of the serpin superfamily includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381053
Aligned: 6 rows
Threshold Bit Score: 635.301
Created: 24-Apr-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reactive center
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, the RC loop is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form.
  • Citation:PMID 9466920

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
EDL81784      40 QGAPPFFNNQKFALSLYKQLPQPKRGKNLIFSPLGIIVPLVLLAFQDKPKARHQVLQDLGFTVTGALDTKAASEYGKLLS 119 Norway rat
XP_004682087  42 STPSAFLNNSYLAFNLYKQMVAKHPDQNFMFSPLSLSIPLTLLAFQAPPEIRTEVLEGLGWGAAQVPEDRVHEHYSELLL 121 star-nosed mole
ELV12138       3 SASSTALNNSHFAFRLYREMVAANPGRNVLFSPLSVSIPLTLLALKAKPAVCSQILKALGFSLAEVANDQAQVHYSQLLR 82  Chinese tree shrew
AAM52988      40 QGAPPFFNNQKFALSLYKQLPQPKRGKNLIFSPLGIIVPLVLLAFQDKPKARHQVLQDLGFTVTGALDTKAASEYGKLLS 119 Norway rat
XP_013220139  37 PTSSLLLDNSHFAFSLYQQLVAPDPDRNVLFSPLSLSAPLTLLALQAKPKARPQILQDLGFHLTGVPESRLHEHPSQLLE 116 thirteen-lined ...
XP_020040970  37 AASSVFLNNWRFAFSLYMQLVIPNPGRNVLFSPLTFSIPLTLLALQTKPEACKQILQGLGFNLTKIPTDQAHMLYGQFLK 116 American beaver
Feature 1                                                                                        
EDL81784     120 NLLHTKN-CGIYTGSLLFIDKTLKPAKTFVKLANSSYNSNVVLISFGNYGLAQKQIDLAIRARTHGKITKLLRiLKPPTN 198 Norway rat
XP_004682087 122 SWLPPPGqCHLDTGSMLFLDKNIHLIRKFANIAQSLYHTKASLIPFNNYKAAQEMMDSFIRKKTQGNIEKLAQtTGPNVV 201 star-nosed mole
ELV12138      83 ALLPDPWkCPTEMGSVLFVDKRRSLVRKFIDTAQNLYRMDVFLTAFKSYATARDYMDFFIRKKTHGKIEKLTQkVNPDTV 162 Chinese tree shrew
AAM52988     120 NLLHTKN-CGIYTGSLLFIDKTLKPAKTFVKLANSSYNSNVVLISFGNYGLAQKQIDLAIRARTHGKITKLLRiLKPPTN 198 Norway rat
XP_013220139 117 ALLSAPGaCRMDTGSMLFLGQGRNPRRKFAQRARSLYRTEIHATSFKNYRVARHQMDLAMEKKTGGKIKTFFEgMKMHSV 196 thirteen-lined ...
XP_020040970 117 ALLPPHGaCQTDTGSVLFVNHRRDLAPKFVQTARSLFHTEVLLASLENSQTARQQMDSIMREKTHGKIRNLLQdLEPHSA 196 American beaver
Feature 1                                                                                        
EDL81784     199 LFLANYNFFKGKWKYPFNRKhTRMRYFWLEDGTKTLVPMMQRVGWFQLQYFSQMHSYVLQLPFTCSISGVFFLPDDGKFE 278 Norway rat
XP_004682087 202 LILANYMLITVEWKYRFNPKfTKMEAFHLKENFLIPVFMMQRLGWFQVHRLNHLHSDLLRLPFSCNITAVFILPDLGLLK 281 star-nosed mole
ELV12138     163 LILANYIFFKGKWKHYFDPKlTEMRPFSVNEKLTVQVPMMHRLGYFQLQYFRHLHSYVLWLPCRCNANTVFILPNMGKVS 242 Chinese tree shrew
AAM52988     199 LFLANYNFFKGKWKYPFNRKhTXMRYFWLEDGTKTLVPMMQRVGWFQLQYFSQMHSYVLQLPFTCSISGVFFLPDDGKFE 278 Norway rat
XP_013220139 197 LILANYIFFKGKWKYRFDPKdTRIMPFSVSKELSVPVPMMQRLGWFQLQYFRHLHSHALQVPCVCNTTALFILPEKGTLA 276 thirteen-lined ...
XP_020040970 197 LILANYILFKGKWKYHFDTKlTEIRPFSVSEGLTVQVPTMQRLGWFHIQHFSRLRSHVLQLPYACNLTAVLILPDVGRAK 276 American beaver
Feature 1                                                                                        
EDL81784     279 ESEKALLEQSFETWIQP-FPMSKRWLFFPKFSIPVALHLENLKHVNSNIKLFSEhmDLSRITLQKAPLTVSTAVHRVELT 357 Norway rat
XP_004682087 282 QVEEALMKEDLNTWTQP-IPPSRRRLFMPKFSLSWRMQLDQLLPELGIWKIFRHfySLSGVAAQTMPMRVSKAVQVAMLT 360 star-nosed mole
ELV12138     243 ETEEALLKENFDTWTQPlTLSSKRRLYLPKFSLRANVQLDQFTPTTGISDIFSYsaGLTGISLQTLPMRVSKAVHVAELT 322 Chinese tree shrew
AAM52988     279 ESEKALLEQSFETWIQP-FPMSKRWLFFPKFSIPVALHLEKLKHVNSNIKLFSEhmDLSRITLQKAPLTVSTAVHRVELT 357 Norway rat
XP_013220139 277 QVEEALMKDNLDKWTEP-FPLNRRKLYFPKLSLTGNYDLDKLVLSPSGLDMFGYgiGLSGISVQTIPIKVSKAVHRVELT 355 thirteen-lined ...
XP_020040970 277 EAEEAIMEESFETWTQPlPLSSRRRLYFPKLSLHESTQLDELVLPASSLDIFSYdtDLSGISLQTTSMKVSKAVHKVELT 356 American beaver
Feature 1            ############     #########                        
EDL81784     358 VNEDGEEKDESQPEPD-----LATLHFNRSFLLLILDETSNSLLFMGKVVNPTR 406 Norway rat
XP_004682087 361 VDEKGAEEEDITDFQFlpkafLPHLRMDKPFLFLIFEENSRSLLLMGKVINPSI 414 star-nosed mole
ELV12138     323 VDEDGAEKEDITGLRFspshlIPILDFNRPFLLLVFAEGSHNLLFMGKVMNPKA 376 Chinese tree shrew
AAM52988     358 VNEDGEEKDESQPEPD-----LATLHFNRSFLLLILDETSNSLLFMGKVVNPTR 406 Norway rat
XP_013220139 356 MDEEGTDKENVASFRYfpkhqIPAVHFNKPFLLLVYQEGSHNILFMGKVINPNA 409 thirteen-lined ground squirrel
XP_020040970 357 MSEDGEEKEDITDLRGlprqlITALHFNRPFLLLIIEESSHNLLFMGKVVNPNA 410 American beaver

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