Conserved Protein Domain Family
RecA-like_Ycf46-like

?
cd19507: RecA-like_Ycf46-like 
ATPase domain of Ycf46 and similar ATPase domains
Ycf46 may play a role in the regulation of photosynthesis in cyanobacteria, especially in CO2 uptake and utilization. This subfamily belongs to the RecA-like NTPase family which includes the NTP binding domain of F1 and V1 H(+)ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. The RecA-like NTPase family also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Statistics
?
PSSM-Id: 410915
Aligned: 11 rows
Threshold Bit Score: 266.542
Created: 27-Nov-2017
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
 
putative ATP
Feature 1:putative ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   # ###                                
BAA10314     229 DIGGLDNLKDWLLRRGgafseqar---ryglpypRGLLLAGIQGTGKSLTAKAIAhhwhlPLLRLDVgrlfgglvgesea 305
NP_924595    224 DIGGLDQLKEWLMRRGaafsdqar---ryglphpRGLLLVGVQGTGKSLTARAIAhhwhlPLLRLDVgrlfaglvgesea 300 Gloeobacter vio...
Q6B952       230 NVGGLNVLKDWLNKRSkafskqak---nygltvpKGILLIGIQGTGKSLIAKAISgqwnlPLLKLDMgkifaslvgqsee 306 Gracilaria tenu...
NP_719154    234 QIAGLHNLKKWLKQRApaahspqgvsaaaqidtpKGVLLLGVQGSGKSLAAKAVAgvwqrPLLRLDMgalynkyigetek 313 Shewanella onei...
O78439       245 DIGGLNELKSWLKFRAasfskrae---eyglpipKGLLLVGIQGTGKSLTAKSIAnewnlPLLKLDVgrlfggiigesea 321 Guillardia theta
P51189       229 DIGGLDALKSWLKKRSrsfskqsf---nygiptpKGLLLVGIQGTGKSLTAKAIAndwtlPLLRLDIgklfgglvgeses 305 Porphyra purpurea
P49541       229 NIGGVDNLKDWLKKRKtsftiqas---nyglptpRGLLLIGIQGTGKSLTAKAIAtewqlPLLKLDVgrlfggivgeses 305 Odontella sinensis
YP_001386924 254 DVGGLENLKRWISKRNkswldsaq---kynlpapKGVLITGVPGCGKSLTAKAISamwqlPLLRLDMgkifsgvvgssee 330 Clostridium bot...
NP_953790    233 QVGGMENLKAWMERREqafglesi---asgaalpKGILMMGIAGCGKSLFVKAIAarwrlPLIRLDMaavydgsfgtpes 309 Geobacter sulfu...
YP_005220983 218 NVGGLENLKEFLQIRKagwdk---------dlpvKGVLLAGVPGGGKSLTAKAAAgvlgtTLVRLDMgrfyskylgeter 288 Klebsiella pneu...
YP_003770596 247 AVGGLDRLKRWLTKRTgtwtpaas---ayhlaapKGLLLTGVPGCGKSLSAVCVAnmwrlPLLRLDLgrvfaglvgssek 323 Amycolatopsis m...
Feature 1                           ##                                                           
BAA10314     306 rTRQMINLAEAlapCVFWIDEIDkafgsmdshgdggttsRVFGAFITWLaektspVFVVATANNVqsLPPELLRkgRFDE 385
NP_924595    301 rTRQMIQLAEAlapCVLFADEIDktfgnptg-gdagtasRVFATFLTWMaektspVFVVATANDVhrLPPELLRkgRFDE 379 Gloeobacter vio...
Q6B952       307 rMRHMIKTAEQsspCILWIDEIDkcftrlnnytdsgtngRVLSTMLTWLsekkkpVFVIATANQVlsLPSELLRkgRFDE 386 Gracilaria tenu...
NP_719154    314 nLRNALELADMmspCILWIDEIEkglsgsn--sdqgistRILGTLLTWMaerkseVFVVATANDIqaLPPELMRkgRMDE 391 Shewanella onei...
O78439       322 rVRQMIQFAETispCILWIDEIDkaftgsnfnndsgttkRVFGTFITWLsekkspVFVVATANNIdsLPPELLRkgRFDE 401 Guillardia theta
P51189       306 rMREMVTIAEGlspCVLWIDEIDkafsnlysqgdsgtsaRVFGTFITWLsekttpVFVVATANTIqnLPSEMLRkgRFDE 385 Porphyra purpurea
P49541       306 rLRQMIDVAETlspCILWIDEMDkafsnndsrgdsgtsnRVLATFISWLsektkpVFVVATANNVdlLPLEIIRkgRFDE 385 Odontella sinensis
YP_001386924 331 nMRKAIKTAEAvspSILWIDEIEkgfggasssgdsgtsmRIFGTFLTWMqekikpVFVVATANNIsnLPSELLRkgRFDE 410 Clostridium bot...
NP_953790    310 sLRKAFRTAEAvapCVLWIDEIEsgisvqgfkaeggpasRLLGSFLTWMqekkapVFVAATANAIemLPAEIIRkgRFDE 389 Geobacter sulfu...
YP_005220983 289 qFNRALQTIEQiapVVVLIDEMEkffgnad--gehevskRLLGSFLYWLqerkkkIFIVATANRVqsLPPELMRagRWDR 366 Klebsiella pneu...
YP_003770596 324 nIRTVIRTAEGiapCVLWVDEIEkglagaggggdggtarRVFGTFLSWMqeksapVFVMATANQVgsLPPEFLRkgRFDE 403 Amycolatopsis m...
Feature 1            
BAA10314     386 IFFV 389
NP_924595    380 VFFV 383 Gloeobacter violaceus
Q6B952       387 IFFL 390 Gracilaria tenuistipitata var. liui
NP_719154    392 IFFV 395 Shewanella oneidensis MR-1
O78439       402 VFFI 405 Guillardia theta
P51189       386 IFFL 389 Porphyra purpurea
P49541       386 IFFL 389 Odontella sinensis
YP_001386924 411 IFFV 414 Clostridium botulinum A str. Hall
NP_953790    390 VFYV 393 Geobacter sulfurreducens PCA
YP_005220983 367 AFFI 370 Klebsiella pneumoniae subsp. pneumoniae HS11286
YP_003770596 404 IFFV 407 Amycolatopsis mediterranei U32

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap